Protein Alignment Rs1 and eIF4A

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_476595.1
• Gene: eIF4A / 33835
• FlyBaseID: FBgn0001942
• Length: 403
• Species: Drosophila melanogaster
• Alignment Length: 409
• Identity: 119/409 - (29%)
• Similarity: 210/409 - (51%)
• Gaps: 19/409 - (4%)

  Fly   135 EDEEDEGEKMQFADTVEA--NEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDI 197
            |..:|....|:....:|:  :|...:|..|||...|:|.|...|:..|:.||...|...:.|||:
  Fly     6 EIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDV 70

  Fly   198 CGCAATGTGKTAAYMLPTLERLLYRPLNNKAI--TRVLVLVPTRELGAQVYQVTKQLCQFTTIDV 260
            ...|.:||||||.:.:..|:::      :.:|  .:.|:|.|||||..|:.:|...|.::..:..
  Fly    71 IAQAQSGTGKTATFSIAILQQI------DTSIRECQALILAPTRELATQIQRVVMALGEYMKVHS 129

  Fly   261 GLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQM 325
            ...|||.:|:....:|.....:|:.||||:.|.| |........|::.:|||||.||...|.:|:
  Fly   130 HACIGGTNVREDARILESGCHVVVGTPGRVYDMI-NRKVLRTQYIKLFVLDEADEMLSRGFKDQI 193

  Fly   326 KEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIRED--KEG 388
            :::........|.:|.||||...|.:::...:..|:.:.|...:.....::|.::.::::  |.|
  Fly   194 QDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLG 258

  Fly   389 DREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQ 453
                .|..|.........::|..|:::..:|...:.:.......:||::.|:.|...:|:|:...
  Fly   259 ----TLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGS 319

  Fly   454 IDVLIATDVAARGLDIVGVKTVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDI 518
            ..|||.||:.|||:|:..|..|||:.:|...|:||||:||..|.||.|::::...:.:|:|:|||
  Fly   320 SRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDI 384

  Fly   519 IKNAESTIKNRIIPPEIIE 537
            .:...:||:.  :|..|.:
  Fly   385 EQFYHTTIEE--MPANIAD 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	114/386 (30%)
eIF4A	NP_476595.1	DEAD-like_helicase_N	6..403	CDD:475120	119/409 (29%)