Protein Alignment Rs1 and Dbp80

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001263168.1
• Gene: Dbp80 / 3354919
• FlyBaseID: FBgn0024804
• Length: 481
• Species: Drosophila melanogaster
• Alignment Length: 485
• Identity: 131/485 - (27%)
• Similarity: 229/485 - (47%)
• Gaps: 80/485 - (16%)

  Fly    97 AEQSDGSEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFA-------------- 147
            |::::..|:....|:|..|:              |:|||.:.|..:..:.:
  Fly     5 AKKAEDQEVSKLVDKLNLDS--------------KSGEETDFDVADPAETSLLIKILGKGLVNTK 55

  Fly   148 ---DTVEAN-----EQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLG--RDICGCAA 202
               |..:.|     ..:.:|..::|...|::.|..:|:..|:.||.:.:|..|..  :::...:.
  Fly    56 LSLDIQQKNPNSPLHSVKTFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQ 120

  Fly   203 TGTGKTAAYMLPTLERL---LYRPLNNKAITRVLVLVPTRELGAQVYQVTKQLCQF-TTIDVGLA 263
            :|||||||::|..|.|:   |..|       :||.|.||.||..|..:|..::.|| ..|.:..|
  Fly   121 SGTGKTAAFVLAMLSRVNVCLNHP-------QVLCLSPTYELAIQTGEVAARMGQFCREIKLRFA 178

  Fly   264 IGGLDVKAQEAVLRQNPDIVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRML------DEYFA 322
            :.|.:|...:.:   ...|:|.|||:|:|.......|.:..|.|.:|||||.|:      |:..
  Fly   179 VRGEEVDRSKKI---EEHILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCI- 239

  Fly   323 EQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLDKPIKVFVNNNQQVAFNLRQEFIRIREDKE 387
             ::.:::|..|   |.:.||||..::|.|.|.:.:..|..:.:...::...|::|.:::.: ::|
  Fly   240 -RIHKMLNPHC---QMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCK-NEE 299

  Fly   388 GDREPILASLICRTFHDHCMVFVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEE 452
            |....|.....|.:. ...::|..||:.|..|...:...|.....|.|:||..|||:.|.:|:..
  Fly   300 GKYNAIQNIYGCISV-GQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSG 363

  Fly   453 QIDVLIATDVAARGLDIVGVKTVINFVMPI------TTEHYIHRVGRTARAGRAGISVS--LAGE 509
            ...|||.|::.:||:||..|..|:||.:|:      ..|.|:||:|||.|...:.::.:  :.|.
  Fly   364 LEKVLITTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGV 428

  Fly   510 KER--KIVKDIIKN---AESTIKNRIIPPE 534
            |..  ||.|:|.::   |||  .:|.:|.|
  Fly   429 KAESGKIGKEINRSSSGAES--GSREMPKE 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	119/404 (29%)
Dbp80	NP_001263168.1	DEADc_DDX19_DDX25	80..277	CDD:350721	64/211 (30%)
		SF2_C_DEAD	288..414	CDD:350174	40/127 (31%)