Protein Alignment Rs1 and ddx54

DIOPT Version :10

• Sequence 1: NP_651970.1
• Gene: Rs1 / 44087
• FlyBaseID: FBgn0021995
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_775375.2
• Gene: ddx54 / 286777
• ZFINID: ZDB-GENE-021220-2
• Length: 862
• Species: Danio rerio
• Alignment Length: 901
• Identity: 233/901 - (25%)
• Similarity: 367/901 - (40%)
• Gaps: 238/901 - (26%)

  Fly    36 KLRHKKVTEFEKGFEFVSSVKEYNQDTWDDLMKYVKRKARTKTDDKIAARLQKR--GGAEAVAAE 98
            ||..:|.:...:..|..|..:|:            :..|..|.|:....|...|  ..:|.|
Zfish     7 KLMRRKKSGANRDHELQSDDEEF------------EVAAGVKDDENTTVRRLPRFPASSECV--- 56

  Fly    99 QSDGSEIDLSEDELKHDNLRLREKKESKKKKKKAGEEDEEDEGEKMQFADTVEANEQITSFYQMN 163
                |:::|...||        .:.::|||||..|                         |..|.
Zfish    57 ----SDVELDTREL--------VRAQNKKKKKSGG-------------------------FQSMG 84

  Fly   164 LSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLERLLYRPLNNKA 228
            ||.|:.:.|...||..|||||..||||.|.|:|:...|.||:|||||:::|..|:|........|
Zfish    85 LSYPVYKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFEKLKAPQAQTGA 149

  Fly   229 ITRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPDIVIATPGRLIDH 293
              |.|:|.|||||..|..:.||:|.:||.:...|.:||..:..|.|.|.:||||:|.|||||: |
Zfish   150 --RALILTPTRELALQTMKFTKELGKFTGLRTALILGGDSMDDQFAALHENPDIIIGTPGRLM-H 211

  Fly   294 IKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMSEQVKDLAAVSLD 358
            :....:..|.|:|.::.|||||:.:..||||::|||......|||:|||||:.:.:.:.|...|.
Zfish   212 VIQEMNLKLQSVEYVVFDEADRLFEMGFAEQLQEIIRRLPDARQTLLFSATLPKLIVEFARAGLT 276

  Fly   359 KPIKVFVNNNQQVAFNLRQEFIRIREDKEGDREPILASLICRTF--HDHCMVFVQTKKQAHRLHI 421
            :|:.:.::.:.:::..|:..|..:|.|   |:..:|..|:....  .:..:|||.||.....|..
Zfish   277 EPVLIRLDVDTKLSEQLKLSFFSLRLD---DKPALLLHLLRNVVKPQEQTVVFVATKHHVEYLKE 338

  Fly   422 LLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVKTVINFVMPITTEH 486
            :|...||....::..|.|..|..|:.:|...::.:|:.|||||||:||..:..|||:..|...:.
Zfish   339 MLSAEGVDCSCIYSALDQTARKISIGRFVHRKVMLLLVTDVAARGIDIPLLDNVINYNFPCKPKL 403

  Fly   487 YIHRVGRTARAGRAGISVSLA----------------------------------GEKERKIVKD 517
            ::|||||.|||||.|.:.||.                                  |...:.::.|
Zfish   404 FLHRVGRVARAGRGGTAYSLVCPDEVPYLYDLHLFLGRPMQLAHPEHTQEADGVFGRVPQSVLDD 468

  Fly   518 --------------------IIKNA-ESTIKNRIIP-PEIIEKYRN-KLT--SLEPEIQNILDEE 557
                                :.:|| :..:|:|.:| .|.|::.|| :||  ::.|.:...|::.
Zfish   469 EECQLITAHQNSLDLQNLRRVSENAYKQYLKSRPVPSAESIKRSRNTQLTDMAVHPLLGCGLEKM 533

  Fly   558 QAERQL------------------AKTEQQLSKTERKLLGQTNERRGWF---------------- 588
            :.:|.|                  :..:...|:..|....:..:|...|
Zfish   534 ELDRLLMVDTIKGYKAKSTIFEINSSNKTSASEVMRAKRSRDRQRVEKFSRARAELRAEPGAGLR 598

  Fly   589 -------QTKQQREAEKDRLALTTGDEDKASGGKGKGKTAGKRKRPE-------------YGGDG 633
                   :|:::.|.|::.|:....:           ...|||:||:             .|.|.
Zfish   599 AEPPVHRETQEEDEEEQEELSTVFSE-----------VVGGKRRRPDAEPHTHKSKKSRAAGRDQ 652

  Fly   634 EDGPPV--KDLEAKR------------------------------NKKKK----EEPRKKTPEQL 662
            |...|.  ||..::|                              |:.|.    :..:|:.....
Zfish   653 EFYIPYRPKDFNSERGLSLDSGAGSFEQQASSAVLDLIGDESNTLNQHKSLMKWDRKKKRFVRDT 717

  Fly   663 AKERAMKEI--EKVSLVRAKMAK------LRKRPGKLGAATE-------VHRSGASDGKPKRRGG 712
            .||...|:|  |...|:|....|      .:|:....|.|::       ..|...|.|:..|..|
Zfish   718 GKEDKHKKIRTESGQLIRGHKKKKSFYEEWKKKYKVEGGASDSDGEGGGAQRGRGSAGRRGRGRG 782

  Fly   713 QSAFTNDLTDVSRGGALRLRSEANRHKKMTKIAAKKKASSVKLTNKAGKNKFNKGK 768
            :||..:..|.....|...:|||....:::.| ..|:||....|.:...|...||||
Zfish   783 RSAAGSQATPAQHQGGSGVRSELKNRQQILK-QRKRKAKQQFLQSGGMKKLRNKGK 837

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rs1	NP_651970.1	SrmB	156..576	CDD:440279	155/498 (31%)
ddx54	NP_775375.2	None