DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rs1 and B0511.6

DIOPT Version :10

Sequence 1:NP_651970.1 Gene:Rs1 / 44087 FlyBaseID:FBgn0021995 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_492779.1 Gene:B0511.6 / 172954 WormBaseID:WBGene00015232 Length:544 Species:Caenorhabditis elegans


Alignment Length:482 Identity:154/482 - (31%)
Similarity:260/482 - (53%) Gaps:36/482 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 IDLSEDELKHDNLRLREKKESKKKKK-------KAGEEDEEDEGEKMQFADTVEANE-QITSF-- 159
            ||:.:..||.   :|::.|:..:|||       :..||::|:|.|:.|...|.|::| :::.|  
 Worm     3 IDVKKKVLKR---KLKQMKDGHEKKKAKEVVVEEPMEEEDEEEVEEEQKHQTEESSETKVSEFLT 64

  Fly   160 ------YQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTAAYMLPTLER 218
                  .:..::..|::|:..||:...|.|||.:|...|.|:|:...|.||:|||.|::||.:| 
 Worm    65 KTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE- 128

  Fly   219 LLYRPLNNKAI--TRVLVLVPTRELGAQVYQVTKQLCQFTTIDVGLAIGGLDVKAQEAVLRQNPD 281
            ||:: ||.|..  |.|:::.|||||..|.|.|..:|.:.:.:..||.:||.:..|::..|.:...
 Worm   129 LLHK-LNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVS 192

  Fly   282 IVIATPGRLIDHIKNTPSFTLDSIEVLILDEADRMLDEYFAEQMKEIINSCCKTRQTMLFSATMS 346
            |::||||||:||::||.:|.:.:::.||:|||||:||..|..:|::::....|.||:||||||.|
 Worm   193 ILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQRQSMLFSATHS 257

  Fly   347 EQVKDLAAVSL-DKPIKVFVNNNQQVAF--NLRQEFIRIREDKEGDREPILASLICRTFHDHCMV 408
            .:|.:|..::| ..|::|.|:...:.|.  .|:|.:|....||   |..:|.:.:.:......||
 Worm   258 PKVDELVKLALHSNPVRVSVHEKAEEATVEGLQQGYIVAPSDK---RLLLLFTFLKKNKTKKVMV 319

  Fly   409 FVQTKKQAHRLHILLGLLGVRAGELHGNLTQQQRLESLKKFKEEQIDVLIATDVAARGLDIVGVK 473
            |..:.......|.||..:.:....:||...||:|..:..:|.:.:..:|:.||||||||||..|.
 Worm   320 FFSSCNSVKFHHELLNYIDIPCMSIHGKQKQQKRTTTFFQFCQAETGILLCTDVAARGLDIPAVD 384

  Fly   474 TVINFVMPITTEHYIHRVGRTARAGRAGISVSLAGEKERKIVKDIIKNAESTIKNRIIPPEIIEK 538
            .::.:........||||||||||.........|....|.......:|.|:.|:..       .|.
 Worm   385 WIVQYDPTDEPREYIHRVGRTARGTNGSGKALLVLRPEELGFLRYLKAAKVTLNE-------FEF 442

  Fly   539 YRNKLTSLEPEIQNILDEEQAERQLAK 565
            ..:|:.:::.:::|::.:.....:.||
 Worm   443 SWSKVANIQSQLENLISKNYYLNKSAK 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rs1NP_651970.1 SrmB 156..576 CDD:440279 136/423 (32%)
B0511.6NP_492779.1 SrmB 65..441 CDD:440279 130/387 (34%)
DUF4217 451..508 CDD:464056 3/19 (16%)

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