DRSC/TRiP Functional Genomics Resources

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Protein Alignment msn and myo3b

DIOPT Version :10

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_073768512.1 Gene:myo3b / 564573 ZFINID:ZDB-GENE-070706-2 Length:1333 Species:Danio rerio


Alignment Length:451 Identity:174/451 - (38%)
Similarity:254/451 - (56%) Gaps:60/451 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMD-------VTEDEEEEIKLEI 77
            |.|.:|.||:..::::|.:|.||||:|||..:.|.|..||:||:|       ...|.:|||:.|.
Zfish    50 IGLESLADPSSDWDIVETIGKGTYGKVYKVINKKDGSQAAVKVLDPINNPSHTNRDVDEEIEAEY 114

  Fly    78 NVLKKYSNHRNIATYYGAFIKKSPPGKDD----QLWLVMEYCGAGSVTDLVKS--TKGQSLKEEW 136
            |:|:..|||.|:..::|.|.|     .|:    |||||:|.|..||||||:|.  .:|:.|:|..
Zfish   115 NILRSLSNHPNVVKFFGMFYK-----ADELSGGQLWLVLELCNGGSVTDLIKGLLMRGKRLEEPI 174

  Fly   137 IAYICREILRGLSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYW 201
            |:||....|.||.:||:|::||||:||.|:|||.:..||||||||||||.....||||.:|||:|
Zfish   175 ISYILCGALLGLQHLHNNRIIHRDVKGNNILLTTDGGVKLVDFGVSAQLTSARLRRNTSVGTPFW 239

  Fly   202 MAPEVIACDENPDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPRLK-SKKW 265
            ||||||||::..|.:||.|.|:|||||||:|:|:..|||.::||::|||.||||..|.|: .::|
Zfish   240 MAPEVIACEQQYDYSYDARCDVWSLGITAIELADGDPPLAEMHPVKALFKIPRNPSPTLRHPEQW 304

  Fly   266 SKKFHGFIDTVLVKDYHQRPYTENLLKHGFI-----KDQPTDRQVRIQLKDHIDRCKKRKQEKER 325
            .:.|..||...|:||:..||...:||:|.||     ||....:|:.:.:::..|...:.|...||
Zfish   305 CRSFSHFIAQCLIKDFETRPSVTHLLEHPFIKQAHGKDTLLRQQLSVLIREQQDVGSRTKTRHER 369

  Fly   326 EDYRYS---GSDNDDD--EPQLAGEHSSIVQAPGGDTLRRNFQQIQ----EGRL----------- 370
            .:.|.:   .|..|||  ..:|..|.:.|..      |::.:|.:|    .|.:           
Zfish   370 INTRKTLIIESCPDDDLVNLELLDEETIIAH------LQKRYQDLQIYTYVGDILIALNPFQNLS 428

  Fly   371 --AAEQQQQHHLMAQAQAQA---AAAHAAAQAQAQLQQQQ-----QQAAAAAAAAAHAAQQ 421
              :.:..:.:|.|.::....   |.|.||.|:...|.:.|     .::.|....:||...|
Zfish   429 IYSPQFSKLYHGMKRSTNPPHIFATADAAYQSMVTLCKDQCIIISGESGAGKTESAHLIVQ 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 138/284 (49%)
CNH 1183..1484 CDD:214481
myo3bXP_073768512.1 None
Blue background indicates that the domain is not in the aligned region.

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