DRSC/TRiP Functional Genomics Resources

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Protein Alignment msn and MYO3B

DIOPT Version :10

Sequence 1:NP_524679.3 Gene:msn / 44030 FlyBaseID:FBgn0010909 Length:1504 Species:Drosophila melanogaster
Sequence 2:XP_011508956.1 Gene:MYO3B / 140469 HGNCID:15576 Length:1386 Species:Homo sapiens


Alignment Length:445 Identity:179/445 - (40%)
Similarity:249/445 - (55%) Gaps:51/445 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 IDLTALKDPAGIFELIEVVGNGTYGQVYKGRHTKTGQLAAIKVMDVTEDEEEEIKLEINVLKKYS 84
            :.|.:|.||...:|:||.:|.||||:|||..:.:.|.|||:|::|...|.:|||:.|.|:|:...
Human    24 LGLESLPDPTDTWEIIETIGKGTYGKVYKVTNKRDGSLAAVKILDPVSDMDEEIEAEYNILQFLP 88

  Fly    85 NHRNIATYYGAFIKKSPPGKDDQLWLVMEYCGAGSVTDLVKSTK--GQSLKEEWIAYICREILRG 147
            ||.|:..:||.|. |:......|||||:|.|..||||:|||...  ||.|.|..|:||....|.|
Human    89 NHPNVVKFYGMFY-KADHCVGGQLWLVLELCNGGSVTELVKGLLRCGQRLDEAMISYILYGALLG 152

  Fly   148 LSYLHSNKVIHRDIKGQNVLLTDNAEVKLVDFGVSAQLDRTIGRRNTFIGTPYWMAPEVIACDEN 212
            |.:||:|::||||:||.|:|||....||||||||||||..|..||||.:|||:|||||||||::.
Human   153 LQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQ 217

  Fly   213 PDATYDNRSDLWSLGITALEMAESQPPLCDLHPMRALFLIPRNSPPR-LKSKKWSKKFHGFIDTV 276
            .|::||.|.|:|||||||:|:.:..|||.|:||::.||.||||.||. |..:||.::|:.||...
Human   218 YDSSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCEEFNHFISQC 282

  Fly   277 LVKDYHQRPYTENLLKHGFIKDQP-----TDRQVRIQLKD--HIDRCKKRKQEK--EREDYRYSG 332
            |:||:.:||...:||.|.|||...     ..:|:...|:|  |.:...|.:.|:  .|..|....
Human   283 LIKDFERRPSVTHLLDHPFIKGVHGKVLFLQKQLAKVLQDQKHQNPVAKTRHERMHTRRPYHVED 347

  Fly   333 SD----NDD-------DEP----QLAGEHSS-IVQAPGGDTL--RRNFQQI-----QEGRLAAEQ 374
            ::    .||       ||.    ||...::. ::....||.|  ...||.:     |..||    
Human   348 AEKYCLEDDLVNLEVLDEDTIIHQLQKRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRL---- 408

  Fly   375 QQQHHLMAQAQAQA---AAAHAAAQAQAQLQQQQ-----QQAAAAAAAAAHAAQQ 421
               :|.:.:|....   |:|.||.|....|.:.|     .::.:....:||...|
Human   409 ---YHGVKRASNPPHIFASADAAYQCMVTLSKDQCIVISGESGSGKTESAHLIVQ 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msnNP_524679.3 STKc_myosinIII_N_like 25..296 CDD:270785 141/273 (52%)
CNH 1183..1484 CDD:214481
MYO3BXP_011508956.1 STKc_myosinIIIB_N 13..303 CDD:270808 143/279 (51%)
MYSc_Myo3 366..1055 CDD:276830 22/102 (22%)
Blue background indicates that the domain is not in the aligned region.

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