DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lip2 and AT1G18460

DIOPT Version :10

Sequence 1:NP_524667.1 Gene:Lip2 / 43980 FlyBaseID:FBgn0024740 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_173281.1 Gene:AT1G18460 / 838426 AraportID:AT1G18460 Length:701 Species:Arabidopsis thaliana


Alignment Length:411 Identity:117/411 - (28%)
Similarity:184/411 - (44%) Gaps:67/411 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 TTMDWLEAQNVSHEVHNVTTADGYQLQLQRLPRLGA-KPVLLVHGLLGSSLGWVCMGPERSLAFQ 98
            |..|.:......:|...|.|:|||.|.|:|:||..| |.|.|.||::.||:|||..|...|.||.
plant   293 TCQDVITELGYPYEAIRVVTSDGYGLLLERIPRRDARKAVYLQHGVMDSSMGWVSNGVVGSPAFA 357

  Fly    99 LHHREYDVWLANLRGVSPYGRQHIDLTDVMVEFWRFSFHEHGAYDLPAIIDHMAKVTGGEQLASR 163
            .:.:.|||:|.|.||:  ..|.|:.......:|||:|.:||...|:||:|:.:.::...|....:
plant   358 AYDQGYDVFLGNFRGL--VSRDHVKKNISSKDFWRYSINEHATEDIPAMIEKIHEIKTSELKLYQ 420

  Fly   164 GGPGQDE---EQIHHQVVLIGHSQAFNAFLVLCAVHPRFNQ---RIQLIQALAPLARLHRQVRFD 222
              |..:|   |...:::.::.||.. .|.:::..:..:..:   |:..:..|:| |..|    :|
plant   421 --PTMEEVVNEDQPYKLCVVSHSLG-GAAVLMYVITRKIEEKPHRLSRLILLSP-AGFH----YD 477

  Fly   223 SFQVRRLMKF--------IKKRQKAYKFEIFPPGYFRKVC-QAKRDLCEYYA---------KQLV 269
            |.....||::        :.:...|:   ..|..:||.:. :..||...|.|         ..:|
plant   478 SNMCFTLMEYTFLFLGPVLSRIVPAF---YIPTKFFRMLLNKLARDFHNYPAVGGLVQTLMSYVV 539

  Fly   270 GSAQNN---KKLLEAFNYEYLLQGGSPREIKHLQQIWKSGDFISYDFGTAE-NLQVYHSVEALS- 329
            |...:|   ...|..:|... :.|.|.|..:||.||..||.|..:|:|::. |:.||.|.|.|. 
plant   540 GGDSSNWVGVMGLPHYNMND-MPGISFRVAQHLAQIKHSGKFKMFDYGSSSANMDVYGSPEPLDL 603

  Fly   330 ---YNISQITVPIILYFGETDAIATPEGVHAIYARMLRSVKSVRRINSKKFNHLDFLISGDVKSL 391
               |.:  |.||:.|..|:.|.:..|..|...| |::|........|..::.||||..|      
plant   604 GEFYGL--IDVPVDLVAGKKDKVIRPSMVRKHY-RVMRDSGVDVSYNEFEYAHLDFTFS------ 659

  Fly   392 VNDKLIEHMEQFFDGRLPYVI 412
                   |.|:.    |.||:
plant   660 -------HREEL----LAYVM 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip2NP_524667.1 PLN02872 24..407 CDD:215470 114/404 (28%)
AT1G18460NP_173281.1 PLN02872 294..>416 CDD:215470 46/123 (37%)
alpha/beta hydrolases 330..632 CDD:473884 89/317 (28%)

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