DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lip2 and lipa

DIOPT Version :10

Sequence 1:NP_524667.1 Gene:Lip2 / 43980 FlyBaseID:FBgn0024740 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001015847.2 Gene:lipa / 548564 XenbaseID:XB-GENE-952977 Length:409 Species:Xenopus tropicalis


Alignment Length:413 Identity:121/413 - (29%)
Similarity:187/413 - (45%) Gaps:76/413 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HSSPPESRYKWTTM---DWLEAQNVSHEVHNVTTADGYQLQLQRLPR------LGAKPVL-LVHG 78
            :|:.||:     ||   :.:..:....|.:.|.|.|||.|.:.|:|.      .|.|||: |.||
 Frog    39 YSADPEA-----TMNISELIRYRGYPSEEYEVLTEDGYILSVNRIPHGVKYASEGPKPVVFLQHG 98

  Fly    79 LLGSSLGWVCMGPERSLAFQLHHREYDVWLANLRGVSPYGRQHIDLTDVMVEFWRFSFHEHGAYD 143
            ||.....||......||.|.|....||||:.|.|| :.:.|:|..|:....|||.||:.|....|
 Frog    99 LLADGSNWVTNLENNSLGFILADAGYDVWIGNSRG-NTWSRKHKSLSPDQEEFWAFSYDELAKKD 162

  Fly   144 LPAIIDHMAKVTGGEQLASRGGPGQDEEQIHHQVVLIGHSQ----AFNAFLVLCAVHPRFNQRIQ 204
            |||::|.:.|.||.|                 |:..:||||    ||.||..|    |:..::|:
 Frog   163 LPAVVDFITKKTGQE-----------------QIFYVGHSQGTTIAFIAFSSL----PQLAKKIK 206

  Fly   205 LIQALAPLARLHRQVRFDSFQVRR---LMKFIKKRQKAYKFEIFPPGYFRKVCQAKRDLCEY-YA 265
            :...|||:|    .|:|....:.:   |.:|:.: :...|.|..|..|.  :.......|.: .|
 Frog   207 MYFGLAPVA----TVKFSKSPLAKLGVLPEFLIE-ELFGKGEFLPQTYL--ITWLATHFCTHAIA 264

  Fly   266 KQLVGSAQNNKKLLEAFNYEYLLQ------------GGSPREIKHLQQIWKSGDFISYDFGTAEN 318
            .:|.|   |...||..||.:.|..            |.|.:.:.|.:|..:||:..::||||..|
 Frog   265 DELCG---NIFFLLSGFNEKNLNMSRVNVYSSHCPAGTSVQNMLHWRQGVRSGELKAFDFGTKGN 326

  Fly   319 LQVYHSVEALSYNISQITVPIILYFGETDAIATPEGVHAIYARMLRSVKSVRRINSKK---FNHL 380
            :..|:......|::..:|||..|:.|..|.:|..:.|    |.:|..|.::  :..|:   :.||
 Frog   327 MIHYNQTTPPFYHVRDMTVPTALWTGGNDWLADRKDV----ALLLTQVSNL--VYHKEIPDWEHL 385

  Fly   381 DFLISGDVKSLVNDKLIEHMEQF 403
            ||:...|....:.:::|..|::|
 Frog   386 DFIWGLDAPERMYNEIIAMMKKF 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lip2NP_524667.1 PLN02872 24..407 CDD:215470 121/413 (29%)
lipaNP_001015847.2 PLN02872 50..409 CDD:215470 116/397 (29%)

Return to query results.
Submit another query.