DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Plap and Plap

DIOPT Version :10

Sequence 1:NP_524666.2 Gene:Plap / 43978 FlyBaseID:FBgn0024314 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_314716.5 Gene:Plap / 1275469 VectorBaseID:AGAMI1_001898 Length:820 Species:Anopheles gambiae


Alignment Length:836 Identity:372/836 - (44%)
Similarity:504/836 - (60%) Gaps:81/836 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LDNYKLSCELLGHSMDVRAVAVGPPTPEGRQTILSGSRDKSTKVWKPHGNEYLESL-TLQDHKNF 68
            ::::||||||:||.:|||||.      ||...|:||||||:.|||:..||...|.: ||..|.|:
Mosquito     4 IEDFKLSCELVGHKLDVRAVT------EGAGFIVSGSRDKTAKVWQAVGNNRYEDVQTLTSHTNY 62

  Fly    69 ISYICFLESERWICTASNDATICIYKQDGFV--------PLLTLKGHESTVCALSAGLEPRSLIS 125
            :..:..:||..|:||.||||||||::..|.:        |:..||||.||||||:.|....:|||
Mosquito    63 VGAVLVVESNGWVCTGSNDATICIFQYPGGLGSGTANAEPIGVLKGHTSTVCALAEGHNATTLIS 127

  Fly   126 GSWDKTARVWTISEAGDVSFVALEGHEAAVWAVATLKEQRKYVTGGADRNIYYWNAKGEKLRLLK 190
            |||||||::|| :..|..:.:.|.||||||||||.|...| |::|.||:||:.||.:||||.:||
Mosquito   128 GSWDKTAKIWT-NAPGSNTNLTLVGHEAAVWAVACLPSGR-YLSGSADKNIFVWNERGEKLAVLK 190

  Fly   191 GHTDCVRGVMGLDANTLLSCGNDAVLRFWNEDGECVREMNGHSNYIYSMARNEALGDQVVVSCGE 255
            ||.|||||:..|.....|||.|||.:|:|::..|||:|.:||||||||:.|::|.|::|.|:.||
Mosquito   191 GHKDCVRGLCPLPKGGFLSCSNDATVRYWSDTYECVKEFHGHSNYIYSIGRSDAWGEEVFVTGGE 255

  Fly   256 DSTLRMWNVITGDELGAPIIHPGISVWSVTCLQNGDIVTGCSDGVVRVFSHVPARQASEAVLKAF 320
            |||:|||::..| .||..:..|..|||:|..|:|||:|.|.||.:||||:....|.|||..|.|:
Mosquito   256 DSTIRMWHLRDG-ALGDALQMPAQSVWAVAGLRNGDMVAGTSDAIVRVFTMSAERAASEEALAAY 319

  Fly   321 DLVVATRKSQINEEIGGVKKTDLPGPEALLSNGTREGQTKMVRHADGSVKCYTWTLGNWNLVGDV 385
            .:.|..|:|:..:::||:...||||||:|||.| |:|||::|||.:|.:.||.||.|.|:.||||
Mosquito   320 RVAVEVRQSESAKQLGGMNVNDLPGPESLLSEG-RDGQTRIVRHPNGKILCYQWTNGKWDCVGDV 383

  Fly   386 TGATGGTQSNSGKKLHEGKEYDFVFSVDISDTEPPIKLPYNRSDDPWQAAQTFIHRHSLPQAYLD 450
            .||:.|   :.||:|:||:|||:||||::||..|.:||||||.:|||..||.|||:|:|||||||
Mosquito   384 MGASDG---DKGKQLYEGREYDYVFSVNLSDDAPNLKLPYNRGEDPWFVAQRFIHKHNLPQAYLD 445

  Fly   451 QVANFIIKNSEGPVLMEQAPTGYQDPFTGGSRYVPGSS---------NT---------------- 490
            ||||||:|||:...:.......|.||||||||||||||         ||                
Mosquito   446 QVANFIVKNSDSAPVQSALANSYYDPFTGGSRYVPGSSGGQFQPTAANTDPFTGGSSYTTQTPNV 510

  Fly   491 --------------NMGSGGNVDPFTGASSYSTASSNAQSQVDVNFVRSGDKHFPVSNYRIFDTC 541
                          |.|:|||:|||||.|||:|.|:.         |:..:.|||..:|.:.:..
Mosquito   511 AMAPNAGGAAAAAANGGNGGNLDPFTGGSSYTTGSTE---------VKKSNTHFPHRHYILLENA 566

  Fly   542 DAKKVLEKMIEFNGKLSLPDGRVGEEVLLAVIKLADQ---SPELDLTSLEALAIL-LKWPASMQF 602
            |..|||.|:.|.|.||.....|:.::.|..:::.|.:   ..|.:...|.||..| ..||....|
Mosquito   567 DLSKVLVKLKELNSKLEDQSLRMSDDTLNDIVRYAGEVMTCGEQNSACLTALKFLYTTWPTEKLF 631

  Fly   603 PVLDILRLAVRNEAIFSVLNNSHNFLATVIPQLSGSAPNQLMVVRCLANIMSHAAGRQNVMSRLA 667
            |::||.||.||.......|....:|:.|.:...:....||||..||..|:::|..||..|:..:.
Mosquito   632 PIMDITRLIVREPRACQELFEDASFMGTFLQHTNHLPANQLMSARCFTNMLAHQPGRNVVVEHIR 696

  Fly   668 EIIDLVGAIKTGSA---NLQIAVATFYLNLTISQTLDVAKSEVCHVVTSGIVELLKWAKDLEACY 729
            .|:|.. |:..|||   |||||:|:||||||::|...::..:.|.|:...|.|||.|..|.||.|
Mosquito   697 AIVDRF-AVLRGSACSPNLQIALASFYLNLTMTQLDKLSSVDFCKVLAGTIGELLCWLTDNEATY 760

  Fly   730 RSMQAIGN-LTTTSCGQETIAQVVSVDYVM-DKLRELTITPQDKNFSKVNSVGQAL 783
            |..||:|| |:....|...||..:..:..: ||:. ..|:.:..||.|:|.....|
Mosquito   761 RGYQALGNLLSMPGPGMGAIADTLKGNSALTDKIL-FNISSELPNFGKLNECASYL 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlapNP_524666.2 WD40 10..305 CDD:238121 157/303 (52%)
WD40 repeat 23..64 CDD:293791 19/41 (46%)
WD40 repeat 70..106 CDD:293791 16/43 (37%)
WD40 repeat 111..149 CDD:293791 18/37 (49%)
WD40 repeat 156..190 CDD:293791 18/33 (55%)
WD40 repeat 196..230 CDD:293791 16/33 (48%)
WD40 repeat 236..277 CDD:293791 19/40 (48%)
WD40 repeat 284..304 CDD:293791 11/19 (58%)
PFU 353..462 CDD:462670 68/108 (63%)
PUL 531..781 CDD:462428 89/258 (34%)
PlapXP_314716.5 None

Return to query results.
Submit another query.