Protein Alignment MED20 and med20

DIOPT Version :9

• Sequence 1: NP_001260223.1
• Gene: MED20 / 43952
• FlyBaseID: FBgn0013531
• Length: 268
• Species: Drosophila melanogaster
• Sequence 2: NP_593728.2
• Gene: med20 / 2542421
• PomBaseID: SPAC17G8.05
• Length: 193
• Species: Schizosaccharomyces pombe
• Alignment Length: 185
• Identity: 38/185 - (20%)
• Similarity: 76/185 - (41%)
• Gaps: 32/185 - (17%)

  Fly    33 ATHAGQFLVDCETFISTPQPHNGAPGRAVHVLHNSEYPASTFSIIDNGTGKQVAIVADNIFDLLM 97
            |.|..:::|..:.:      .|....:.:..|..:..| |..:.:|..|    .|.|:...:.::
pombe    31 AQHLKKWVVQYKLY------RNAVTPKTLEFLKQNINP-SMLACVDEAT----MIDAEPELEDII 84

  Fly    98 LKMTNTFTSKKQTKIESRGARFEYGDFVIKLGSVTMMEHFKGILIEIEYKSCVILAYCWEMIRE- 161
            :: |..:..::...||  |:.:|.|.|.:.:.:|.....:||||..:.|.....:.....:|:|
pombe    85 VR-TKLWNFRQSFTIE--GSIYEVGSFKVAIANVLQKSVWKGILFHVTYDGTESVDLARPIIQEF 146

  Fly   162 MLQGFL--GIAVNKDFPSYFAPQTIMTAMGQQQLHAKHNDIF-----EPMDTVKQ 209
            .|:.||  ..:|...:.|:|          .|..|:..:.:.     :.:|||.|
pombe   147 FLKCFLQNNKSVTPVYESFF----------NQPRHSLDSKLLLQLFKQRIDTVSQ 191

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
MED20	NP_001260223.1	Med20	1..215	CDD:285776	38/185 (21%)
med20	NP_593728.2	Med20	25..180	CDD:312207	34/172 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_104763
Panther	1	1.100	-	-	LDO	PTHR12465
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000