Sequence 1: | NP_524660.1 | Gene: | sbr / 43944 | FlyBaseID: | FBgn0003321 | Length: | 672 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001287065.1 | Gene: | ssp2 / 39540 | FlyBaseID: | FBgn0036389 | Length: | 982 | Species: | Drosophila melanogaster |
Alignment Length: | 511 | Identity: | 104/511 - (20%) |
---|---|---|---|
Similarity: | 180/511 - (35%) | Gaps: | 140/511 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 173 NGHLPDGYRLMPRVRSGIPLVAIDDAFKEKMKVTMAKRYN------IQTKALDLSRFHADPD--L 229
Fly 230 KQVFCPL---FRQNVMGAAIDIMCDNIPDLEALNLNDNSISSMEAFKGVEKRLPNLKILYLGDNK 291
Fly 292 IPSLAHLVVLRNLSILELVLKNNPCRSRYKDSQQFISEVRRKFPKLVKLDGETLEPQITFDLSEQ 356
Fly 357 ---GRLLETKASYLCDVAGAEVVRQFLDQYFRIFDSGNRQALLDAYHEKAMLSISMPSASQAGRL 418
Fly 419 NSFWKFNRNLRRLLNGEENRTRNLKYGRLACVSTLDEWPKTQ-----------------HDRRTF 466
Fly 467 TVDLTIYNTSMMVFTVTGLFKELNDETNNPASME------LYDVRHFARTYVVVPQNNG-----F 520
Fly 521 CIRNETIFITN---------ATHEQVRE----FKRSQHQPAP-GAMPSTSSAVTSPQAGA----A 567
Fly 568 AGLQGRLNALGVATGPVAILSGDPLAATAPVNSGSAAISTTAVAPGAQDESTKMQM 623 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
sbr | NP_524660.1 | Tap-RNA_bind | 112..191 | CDD:286271 | 4/17 (24%) |
leucine-rich repeat | 215..255 | CDD:275382 | 8/44 (18%) | ||
LRR_RI | <223..341 | CDD:238064 | 22/122 (18%) | ||
LRR_8 | 256..315 | CDD:290566 | 11/58 (19%) | ||
LRR_4 | 256..298 | CDD:289563 | 8/41 (20%) | ||
leucine-rich repeat | 256..281 | CDD:275382 | 5/24 (21%) | ||
leucine-rich repeat | 282..305 | CDD:275382 | 3/22 (14%) | ||
leucine-rich repeat | 306..336 | CDD:275382 | 4/29 (14%) | ||
NTF2 | 372..531 | CDD:238403 | 38/186 (20%) | ||
Big_3_5 | <578..>614 | CDD:293246 | 10/35 (29%) | ||
TAP_C | 609..671 | CDD:197882 | 3/15 (20%) | ||
ssp2 | NP_001287065.1 | PHA03247 | <676..965 | CDD:223021 | 32/133 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3763 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |