DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: or and ap1s3a

Sequence 1:NP_536793.1 Gene:or FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_009290225.1 Gene:ap1s3a ZFINID:ZDB-GENE-050417-222 Length:163 Species:Danio rerio

Alignment Length:146 Identity:53/147 (36%)
Similarity:87/147 (59%) Gaps:6/147 (4%)


  Fly     2 IKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYR 66
            ::.:|:|:..||.||.|::....:..:::||::..|:|..|....||||.      ..|.|::||
Zfish    11 MRFLLLFSRQGKLRLQKWFTVLSDRDKRKIIRDLTQMVLSRPPKACNFLP------WRDLKIVYR 69

  Fly    67 HYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQ 131
            .||:|||...::..::||..||::..:||.||:.|.||||||:||:.:..:.||.|.|:||.|.:
Zfish    70 RYASLYFCCGLEQDDNELLTLDILHRYVELLDQYFGNVCELDIIFNFEKAYFILDEFVIGGEVQE 134

  Fly   132 TNMNDIMARIEEQNKI 147
            |:...:...|||...:
Zfish   135 TSKASVAKSIEEAESL 150

Known Domains:


GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 APS2 1..143 CDD:227363 52/141 (37%)
ap1s3aXP_009290225.1 Clat_adaptor_s 10..151 CDD:250451 53/147 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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