DRSC/TRiP Functional Genomics Resources

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Protein Alignment or and ap1s3b

DIOPT Version :10

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001004635.1 Gene:ap1s3b / 447897 ZFINID:ZDB-GENE-040912-62 Length:154 Species:Danio rerio


Alignment Length:159 Identity:53/159 - (33%)
Similarity:91/159 - (57%) Gaps:6/159 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            |:..:|:|:..||.||.|::....|..:::|:|:...:|..|....|||:.      ..|.|::|
Zfish     1 MMHFLLLFSRQGKLRLQKWFLPLPERDRKKIVKDMTTMVLARKPRTCNFMH------WKDLKIVY 59

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            :.||:|||...:::.::||..|:::..:||.|||.|.||||||:||:.:..:.||.|.:|||.:.
Zfish    60 KRYASLYFCCGLENQDNELLALEILHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFLMGGEIQ 124

  Fly   131 QTNMNDIMARIEEQNKIVKQEAGISAAPA 159
            :|:...|...||..:.:.:......:.||
Zfish   125 ETSKQSIAKSIEASDMLQETMEEYMSKPA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 51/144 (35%)
ap1s3bNP_001004635.1 AP1_sigma 3..143 CDD:341435 50/145 (34%)

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