DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: or and ap1s3b

Sequence 1:NP_536793.1 Gene:or FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001004635.1 Gene:ap1s3b ZFINID:ZDB-GENE-040912-62 Length:154 Species:Danio rerio

Alignment Length:159 Identity:53/160 (33%)
Similarity:91/160 (57%) Gaps:6/160 (4%)


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            |:..:|:|:..||.||.|::....|..:::|:|:...:|..|....|||:.      ..|.|::|
Zfish     1 MMHFLLLFSRQGKLRLQKWFLPLPERDRKKIVKDMTTMVLARKPRTCNFMH------WKDLKIVY 59

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            :.||:|||...:::.::||..|:::..:||.|||.|.||||||:||:.:..:.||.|.:|||.:.
Zfish    60 KRYASLYFCCGLENQDNELLALEILHRYVELLDKYFGNVCELDIIFNFEKAYFILDEFLMGGEIQ 124

  Fly   131 QTNMNDIMARIEEQNKIVKQEAGISAAPA 159
            :|:...|...||..:.:.:......:.||
Zfish   125 ETSKQSIAKSIEASDMLQETMEEYMSKPA 153

Known Domains:


GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 APS2 1..143 CDD:227363 51/142 (36%)
ap1s3bNP_001004635.1 Clat_adaptor_s 1..142 CDD:250451 51/147 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.