DRSC/TRiP Functional Genomics Resources

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Protein Alignment: or and Ap4s1

Sequence 1:NP_536793.1 Gene:or FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001124471.1 Gene:Ap4s1 RGDID:1311990 Length:144 Species:Rattus norvegicus

Alignment Length:139 Identity:55/140 (39%)
Similarity:83/140 (59%) Gaps:6/140 (4%)


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            |||..|:.|..|:.||||:|::.|.:.:..:..|..:....|....|:|:|      ..|:||||
  Rat     1 MIKFFLMVNRQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIE------YKDFKLIY 59

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            |.||.|:.|..|:.:|:|:.|.:.|..|||.||:.|..|.|||::|:.|.||.||.|:|:.|.::
  Rat    60 RQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIV 124

  Fly   131 QTNMNDIMA 139
            :||...|:|
  Rat   125 ETNRARILA 133

Known Domains:


GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 APS2 1..143 CDD:227363 55/140 (39%)
Ap4s1NP_001124471.1 APS2 1..143 CDD:227363 55/140 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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