Protein Alignment or and Ap4s1

DIOPT Version :10

• Sequence 1: NP_536793.1
• Gene: or / 43943
• FlyBaseID: FBgn0003008
• Length: 191
• Species: Drosophila melanogaster
• Sequence 2: NP_001124471.1
• Gene: Ap4s1 / 366618
• RGDID: 1311990
• Length: 144
• Species: Rattus norvegicus
• Alignment Length: 139
• Identity: 55/139 - (39%)
• Similarity: 83/139 - (59%)
• Gaps: 6/139 - (4%)

  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            |||..|:.|..|:.||||:|::.|.:.:..:..|..:....|....|:|:|      ..|:||||
  Rat     1 MIKFFLMVNRQGQTRLSKYYEHVDINKRALLETEVSKSCLSRSSEQCSFIE------YKDFKLIY 59

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            |.||.|:.|..|:.:|:|:.|.:.|..|||.||:.|..|.|||::|:.|.||.||.|:|:.|.::
  Rat    60 RQYAALFVVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMFNLDKVHIILDEMVLNGCIV 124

  Fly   131 QTNMNDIMA 139
            :||...|:|
  Rat   125 ETNRARILA 133

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
or	NP_536793.1	AP3_sigma	1..146	CDD:341438	55/139 (40%)
Ap4s1	NP_001124471.1	AP4_sigma	3..140	CDD:341436	53/137 (39%)