DRSC/TRiP Functional Genomics Resources

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Protein Alignment: or and Ap1s2

Sequence 1:NP_536793.1 Gene:or FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_006256922.1 Gene:Ap1s2 RGDID:1561862 Length:160 Species:Rattus norvegicus

Alignment Length:158 Identity:56/159 (35%)
Similarity:94/159 (59%) Gaps:8/159 (5%)


  Fly     5 ILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIYRHYA 69
            :|:|:..||.||.|:|....:..:::|.:|..|.|..|...:|:|||      ..|.|::|:.||
  Rat     4 MLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLE------WRDLKIVYKRYA 62

  Fly    70 TLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVLQTNM 134
            :|||...::..::||..|::|..:||.|||.|.:|||||:||:.:..:.||.|.::||.|.:|:.
  Rat    63 SLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGGEVQETSK 127

  Fly   135 NDIMARIEEQNKIVKQEAGISAAPARAV 162
            .:::..||:.:.:  ||....|...|:|
  Rat   128 KNVLKAIEQADLL--QEDAKEAETPRSV 153

Known Domains:


GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 APS2 1..143 CDD:227363 51/138 (37%)
Ap1s2XP_006256922.1 AP1_sigma 2..144 CDD:341435 53/148 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG5030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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