DRSC/TRiP Functional Genomics Resources

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Protein Alignment or and Ap3s1

DIOPT Version :10

Sequence 1:NP_536793.1 Gene:or / 43943 FlyBaseID:FBgn0003008 Length:191 Species:Drosophila melanogaster
Sequence 2:XP_036016836.1 Gene:Ap3s1 / 11777 MGIID:1337062 Length:209 Species:Mus musculus


Alignment Length:206 Identity:147/206 - (71%)
Similarity:167/206 - (81%) Gaps:23/206 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIKAILVFNNHGKPRLSKFYQYFDESLQQQIIKETFQLVSKRDDNVCNFLEGGSLIGGSDYKLIY 65
            ||||||:||||||||||||||.:.|..|||||:|||.||||||:|||||||||.||||||.||||
Mouse     1 MIKAILIFNNHGKPRLSKFYQPYSEDTQQQIIRETFHLVSKRDENVCNFLEGGLLIGGSDNKLIY 65

  Fly    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHADAVHHILSELVMGGMVL 130
            |||||||||||||||||||||||||||||||||||||||||||||||.|.||:||:|:|||||||
Mouse    66 RHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIFHVDKVHNILAEMVMGGMVL 130

  Fly   131 QTNMNDIMARIEEQNKIVKQE----------------AGISAAPARAVSAVKSMNIPQ-----QI 174
            :||||:|:.:|:.|||:.|.|                ||::.||||||||||:||:|:     .|
Mouse   131 ETNMNEIVTQIDAQNKLEKSEQIVYTGLFCISQDFSQAGLAGAPARAVSAVKNMNLPEIPRNINI 195

  Fly   175 KD--IKLPDLP 183
            .|  ||:|:||
Mouse   196 GDISIKVPNLP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
orNP_536793.1 AP3_sigma 1..146 CDD:341438 121/144 (84%)
Ap3s1XP_036016836.1 AP3_sigma 1..146 CDD:341438 121/144 (84%)

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