DRSC/TRiP Functional Genomics Resources

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Protein Alignment NtR and htr3a

DIOPT Version :10

Sequence 1:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_073791438.1 Gene:htr3a / 571641 ZFINID:ZDB-GENE-071012-5 Length:494 Species:Danio rerio


Alignment Length:439 Identity:84/439 - (19%)
Similarity:159/439 - (36%) Gaps:102/439 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SFSSFGSNTARW----------FYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANL 236
            |....|:||.|:          |...   ||...:.| |::..::..:...|.:.|         
Zfish    22 SVKKLGNNTGRFANATLVRLNEFLSA---GYKKGVRP-VRDWRQSTTVAIDLMVYA--------- 73

  Fly   237 SSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLN 301
                      .|..::.:.:|.|.:.....|.|..|:|.||:|..::....|...||.|  ::|.
Zfish    74 ----------ILNVDEKNQVLTTYVWYRQQWTDEFLMWDPEEFDEVKKISIPTANIWIP--DILI 126

  Fly   302 GALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDI--ELGLNGQEGQE 364
            .....:|:......:.|..:|.::.| :.:|:.:.|..:..|:|.:...|.:  :..|:..: ..
Zfish   127 NEFVDVGKSPDIPYVYVGHDGLVSNY-KPIQVVTACSLNIYNFPYDVQKCSLTFQSWLHTTK-DI 189

  Fly   365 NVALIYDDQRKPIAPNEHVNTPSG-------WSFTQM----SVVLVENDSQRRYNPKGMMQKMTG 418
            |:.|:    |.|    |.|.|...       |....:    :...::||.            ...
Zfish   190 NITLM----RSP----EAVKTDKSVFMNQGEWELLHVLSTYNAFSIDNDD------------YYA 234

  Fly   419 DVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVL---RSTRRSSLILIALLIAAWGLMYMTRY 480
            ::.....::|...||.....||.:...:..|:.|.|   ...|.|..|.:.|..:.:.::.....
Zfish   235 EMKFHVVIRRRPLFYTVNLLLPSMFLMVMDIVGFYLPPDSGERVSFKITLLLGYSVFLIIVSDTL 299

  Fly   481 ASPHYVPPMMTAYKVIMMTTTYCYILH-ICIIWL----DLYPPRSKAPGWLVRVI--NSNVLRCI 538
            .:.....|::..|.|:.|......:.. :.|:.|    ||   :|:.|.|:..::  .:.||.||
Zfish   300 PATAIGTPLIGVYFVVCMALLVISLTESVLIVRLVHKQDL---QSRVPQWVKHLVLEKATVLLCI 361

  Fly   539 LGLRF----SDSTDYCDIQENPWHHMAKILNNLSS-----ILVIITFAI 578
            ...:.    |..:|....:|          ||:::     .|.:||.||
Zfish   362 RNKKICSFRSQGSDLPLYKE----------NNMNTAEQQDTLTMITSAI 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 89..191 CDD:463505 3/8 (38%)
Neur_chan_LBD 212..429 CDD:460752 37/229 (16%)
htr3aXP_073791438.1 None

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