Protein Alignment NtR and chrna4b

DIOPT Version :10

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_001041528.1
• Gene: chrna4b / 556619
• ZFINID: ZDB-GENE-090505-3
• Length: 627
• Species: Danio rerio
• Alignment Length: 324
• Identity: 70/324 - (21%)
• Similarity: 132/324 - (40%)
• Gaps: 31/324 - (9%)

  Fly   217 EKLLSHLNIQAENASMP-ANLSSISF-HFQ---TRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKP 276
            |:||..|.|.....|.| ||:|.:.. ||.   .:.:..::.:.::.|.:.:...|.|.:|.|.|
Zfish    32 ERLLQSLFINYNKLSRPVANISDVVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNP 96

  Fly   277 EDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSA 341
            |::.::.|...|...||:|.:.:.|.|..... |....:..|:.||.|......:..:|..:| .
Zfish    97 EEYENVTSIRIPSEIIWRPDIVLYNNADGDFA-VTHLTKAQVFYNGRIKWKPPAIYKSSCSID-V 159

  Fly   342 RNWPSERVTCDIELGLNGQEGQENVALIYDDQR-KPIAPNEHVNTPSGWSFTQMSVVLVENDSQR 405
            ..:|.::..|.::.|          :..||..: ..|:....|:....|...:..::    ::..
Zfish   160 TFFPFDQQNCKMKFG----------SWTYDRAKIDLISMASDVDQMDYWESGEWVII----NAVG 210

  Fly   406 RYNPK--GMMQKMTGDVAIEFTLQRNRSFYMTVFYLP--LIACQMFLILSFVLRSTRRSSLILIA 466
            .||.|  ....::..|:...|.::|...||.....:|  ||:|...|:.........:.:|.:..
Zfish   211 TYNIKKYECCTEIYPDITYSFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSECAEKITLCISV 275

  Fly   467 LLIAAWGLMYMTR-YASPHYVPPMMTAYKVIMMTTTYCYILHICIIWLDLYPPRSKA---PGWL 526
            ||.....|:.:|. ..|...|.|::..|.:..|......|: |.:..|:::...|:.   |.|:
Zfish   276 LLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSII-ITVFVLNVHHRSSRTHSMPHWV 338

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	89..191	CDD:463505
		Neur_chan_LBD	212..429	CDD:460752	46/219 (21%)
chrna4b	NP_001041528.1	LGIC_ECD	31..237	CDD:475126	47/220 (21%)
		Neur_chan_memb	244..618	CDD:460753	21/96 (22%)