Protein Alignment: NtR and nAChRalpha7

• Sequence 1: NP_651958.2
• Gene: NtR
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_001162795.1
• Gene: nAChRalpha7
• FlyBaseID: FBgn0086778
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 357
• Identity: 78/358 (22%)
• Similarity: 132/358 (37%)
• Gaps: 42/358 (12%)

  Fly   200 DGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLA-YEQTSSLLQTRMHM 263
            |.|.|...|:|                  |.|.|..|   ||......:. .::.:.||.|.:.:
  Fly    70 DNYNSLERPVV------------------NESDPLQL---SFGLTLMQIIDVDEKNQLLITNIWL 113

  Fly   264 MMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYANGSITLYA 328
            .:.|.|..|.|...:||.:.....|..|:|||.:.:.|.|.:.......: .::|..||| .||.
  Fly   114 KLEWNDMNLRWNSSEFGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYAT-NVVVRNNGS-CLYV 176

  Fly   329 QNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWSFTQ 393
            ......|.|......:|.:...|:::.|....:|.:....:.|:....|:   ...|...|..
  Fly   177 PPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDIS---SFITNGEWDL-- 236

  Fly   394 MSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVL--RS 456
            :.|....|:......|:..:     |:.....::|...:|.....:|.:......:|.|.|  .|
  Fly   237 LGVPGKRNEIYYNCCPEPYI-----DITFAILIRRKTLYYFFNLIVPCVLIASMALLGFTLPPDS 296

  Fly   457 TRRSSL---ILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVIMMTTTYCYILHICII-WLDLYP 517
            ..:.||   ||::|.:.. .::..|..|:...||.:.|.:..||.......:..|.|: :....|
  Fly   297 GEKLSLGVTILLSLTVFL-NMVAETMPATSDAVPLLGTYFNCIMFMVASSVVSTILILNYHHRNP 360

  Fly   518 PRSKAPGWLVRVINSNVLRCILGLRFSDSTDY 549
            ...:...| :|||....|.|||.::......|
  Fly   361 DTHEMSEW-IRVIFLYWLPCILRMQRPGQVGY 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	43/218 (20%)
nAChRalpha7	NP_001162795.1	LIC	59..548	CDD:273305	78/358 (22%)
		Neur_chan_LBD	61..268	CDD:280998	48/231 (21%)
		Neur_chan_memb	275..552	CDD:280999	29/120 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			P	PTHR18945
RoundUp	0	0.000	Not matched by this tool.
	1	1.100