DRSC/TRiP Functional Genomics Resources

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Protein Alignment NtR and HTR3E

DIOPT Version :10

Sequence 1:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001243543.1 Gene:HTR3E / 285242 HGNCID:24005 Length:482 Species:Homo sapiens


Alignment Length:380 Identity:62/380 - (16%)
Similarity:112/380 - (29%) Gaps:144/380 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 NASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIW 293
            |.|:|..: :|||          ..|::|.      :.|.:..:.|.||:...:.........:|
Human    74 NISVPTQV-NISF----------AMSAILD------VVWDNPFISWNPEECEGITKMSMAAKNLW 121

  Fly   294 KPHMNVLN------------------------GALQSMGQVLQSYELMVYANGSITLYAQNLQLA 334
            .|.:.::.                        |.|..:.:..:.....|...|.|. |.:.:::.
Human   122 LPDIFIIELCVSRAGQREVPSPGSHRDHSLPLGPLMDVDKTPKGLTAYVSNEGRIR-YKKPMKVD 185

  Fly   335 SWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYD------DQRKPIAPNEHVNTPSGWSFTQ 393
            |.|......:|.::..|.:...          :.:|.      |..|.:           |..|.
Human   186 SICNLDIFYFPFDQQNCTLTFS----------SFLYTVDSMLLDMEKEV-----------WEITD 229

  Fly   394 MSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFY-MTVFYLPLIACQMFLILSFVLRST 457
            .|..:::...:         .::.|.......|.|..:.| ..|||:.:               .
Human   230 ASRNILQTHGE---------WELLGLSKATAKLSRGGNLYDQIVFYVAI---------------R 270

  Fly   458 RRSSLILIAL------LIAAWGLMYMTRYASPHYVP---PMMTAYKVIMM--------------- 498
            ||.||.:|.|      |:|...|.:.....|.:.||   .::..|.|.::               
Human   271 RRPSLYVINLLVPSGFLVAIDALSFYLPVKSGNRVPFKITLLLGYNVFLLMMSDLLPTSGTPLIG 335

  Fly   499 ----------------TTTYCYILHICIIWLDLYPPRSKAPGWLVRVINSNVLRC 537
                            |....::||:.    ...||  ..|.||    :|.:|.|
Human   336 VYFALCLSLMVGSLLETIFITHLLHVA----TTQPP--PLPRWL----HSLLLHC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 89..191 CDD:463505
Neur_chan_LBD 212..429 CDD:460752 32/229 (14%)
HTR3ENP_001243543.1 LGIC_ECD 46..272 CDD:475126 37/260 (14%)
LIC 70..480 CDD:455710 62/380 (16%)
Blue background indicates that the domain is not in the aligned region.

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