Protein Alignment: NtR and Chrnb4

• Sequence 1: NP_651958.2
• Gene: NtR
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_434693.1
• Gene: Chrnb4
• RGDID: 2351
• Length: 495
• Species: Rattus norvegicus
• Alignment Length: 326
• Identity: 72/327 (22%)
• Similarity: 128/327 (39%)
• Gaps: 67/327 (20%)

  Fly   217 EKLLSHL--NIQAENASMPANLSS--ISFHFQ---TRSLAYEQTSSLLQTRMHMMMHWRDSRLVW 274
            |||:..|  ..:..|...||..||  ||...:   ::.::..:...::.|.:.:...|.|.||.|
  Rat    27 EKLMDDLLNKTRYNNLIRPATSSSQLISIRLELSLSQLISVNEREQIMTTSIWLKQEWTDYRLAW 91

  Fly   275 KPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVY------ANGSI-----TLY- 327
            ....:..:.....|..|:|.|.:.:.|.|       ..:||:.||      :||||     .:|
  Rat    92 NSSCYEGVNILRIPAKRVWLPDIVLYNNA-------DGTYEVSVYTNVIVRSNGSIQWLPPAIYK 149

  Fly   328 -AQNLQLASW------CVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNT 385
             |..:::..:      |....|:|..:....|:.|        ::...|.||           .|
  Rat   150 SACKIEVKHFPFDQQNCTLKFRSWTYDHTEIDMVL--------KSPTAIMDD-----------FT 195

  Fly   386 PSG-WSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLI 449
            ||| |.       :|....:|..||:   .....||..:|.::|...||.....:|.:......|
  Rat   196 PSGEWD-------IVALPGRRTVNPQ---DPSYVDVTYDFIIKRKPLFYTINLIIPCVLITSLAI 250

  Fly   450 LSFVLRST--RRSSLILIALLIAAWGLMYMTRYASPHYVP-PMMTAYKVI-MMTTTYCYILHICI 510
            |.|.|.|.  .:.:|.:..||...:.|:.:::...|..:. |::..|.:. |:..|:..:..:|:
  Rat   251 LVFYLPSDCGEKMTLCISVLLALTFFLLLISKIVPPTSLDIPLIGKYLLFTMVLVTFSIVTTVCV 315

  Fly   511 I 511
            :
  Rat   316 L 316

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	54/239 (23%)
Chrnb4	NP_434693.1	LIC	21..483	CDD:273305	72/327 (22%)
		Neur_chan_LBD	26..231	CDD:280998	54/240 (23%)
		Neur_chan_memb	238..481	CDD:280999	16/80 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100