DRSC/TRiP Functional Genomics Resources

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Protein Alignment: NtR and Glra4

Sequence 1:NP_651958.2 Gene:NtR FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_034427.2 Gene:Glra4 MGIID:95750 Length:456 Species:Mus musculus

Alignment Length:311 Identity:68/312 (22%)
Similarity:121/312 (39%) Gaps:78/312 (25%)


  Fly   201 GYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLAYEQTSSLLQTRMHMMM 265
            ||.:.|.|               |.:....::..|:...||...|      :|:...:..:.:..
Mouse    56 GYDARIRP---------------NFKGPPVNVTCNIFINSFGSVT------ETTMDYRVNVFLRQ 99

  Fly   266 HWRDSRLVWK--PEDFGSLESFEHPDL--RIWKPHMNVLNGALQSMGQVLQSYELM-VYANGSIT 325
            .|.|.||.::  |:|...|:    |.:  .||||.:...|....:..:|....:|: ::.||:: 
Mouse   100 QWNDPRLAYREYPDDSLDLD----PSMLDSIWKPDLFFANEKGANFHEVTTDNKLLRIFKNGNV- 159

  Fly   326 LYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGWS 390
            ||:..|.|...|....:|:|.:..||.::|...|....:.:....:|     ||  .|....|.:
Mouse   160 LYSIRLTLILSCPMDLKNFPMDIQTCTMQLESFGYTMNDLMFEWLED-----AP--AVQVAEGLT 217

  Fly   391 FTQMSVVLVEND---SQRRYNPKGMMQKMTGD---VAIEFTLQRNRSFYMTVFYLPLIACQMFLI 449
            ..|. ::..|.|   ..:.||        ||.   :.::|.|:|...:|:...|:|         
Mouse   218 LPQF-ILRDEKDLGYCTKHYN--------TGKFTCIEVKFHLERQMGYYLIQMYIP--------- 264

  Fly   450 LSFVLRSTRRSSLILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVIMMTT 500
                       ||:::   |.:|...::...|:|..|...:|.  |:.|||
Mouse   265 -----------SLLIV---ILSWVSFWINMDAAPARVGLGITT--VLTMTT 299

Known Domains:


GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 90..191 CDD:289052
Neur_chan_LBD 212..429 CDD:280998 49/228 (21%)
Glra4NP_034427.2 LIC 9..444 CDD:273305 68/312 (22%)
Strychnine-binding. {ECO:0000250|UniProtKB:O93430} 236..241 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR18945
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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