Protein Alignment: NtR and Chrna5

• Sequence 1: NP_651958.2
• Gene: NtR
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: XP_006510836.1
• Gene: Chrna5
• MGIID: 87889
• Length: 467
• Species: Mus musculus
• Alignment Length: 459
• Identity: 78/460 (17%)
• Similarity: 155/460 (34%)
• Gaps: 150/460 (33%)

  Fly   199 FDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSISFHFQTRSLA-YEQTSSLLQTRMH 262
            |:.|...:.|:   |..::|:                  .|.|......|. .::.:.|:.|.:.
Mouse    55 FEDYEKWVRPV---EHLSDKI------------------KIKFGLAISQLVDVDEKNQLMTTNVW 98

  Fly   263 MMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVL---NGALQSMGQVLQSYELMVYANGSI 324
            :...|.|.:|.|.|:|:|.::....|...:|.|.:.:.   :|..:.     .|.:.:|..||::
Mouse    99 LKQEWIDVKLRWNPDDYGGIKIIRVPSDSLWIPDIVLFDNADGRFEG-----ASTKTVVRYNGTV 158

  Fly   325 TLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSGW 389
            | :.|.....|.|......:|.:...|.::.|                               .|
Mouse   159 T-WTQPANYKSSCTIDVTFFPFDLQNCSMKFG-------------------------------SW 191

  Fly   390 SF--TQMSVVLVENDSQRR-YNPKGMMQKMT-----GD----------VAIEFTLQRNRSFYMTV 436
            ::  :|:.::|.:.|..|. :...|..:.|:     |:          :...|.::|...||...
Mouse   192 TYDGSQVDIILEDQDVDRTDFFDNGEWEIMSAMGSKGNRTDSCCWYPCITYSFVIKRLPLFYTLF 256

  Fly   437 FYLPLIACQMFLILSFVLRSTRRSSL-----ILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVI 496
            ..:|.|......::.|.|.|.....:     :|::|.:  :.|:......|...|.|::..|.|.
Mouse   257 LIIPCIGLSFLTVVVFYLPSNEGEKISLCTSVLVSLTV--FLLVIEEIIPSSSKVIPLIGEYLVF 319

  Fly   497 --------MMTTTYCYILH-------------ICIIWLDLYPP----RSKAPGWL---------- 526
                    :|.|.:...:|             :..|:|...|.    ||.|..:.
Mouse   320 TMIFVTLSIMVTVFAINIHHRSSSTHNAMAPWVRKIFLHKLPKLLCMRSHADRYFTQREEAEKDG 384

  Fly   527 --------------VRVINSNVLRCILGLRFSDSTDYCDIQENPWHHMAKILNNLSSILVIITFA 577
                          :|.|..:|::         ..|..::.|: |..:|::|:.    :.:.||.
Mouse   385 GPKSRNTLEAALDCIRYITRHVVK---------ENDVREVVED-WKFIAQVLDR----MFLWTFL 435

  Fly   578 IVDI 581
            :|.|
Mouse   436 LVSI 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	39/239 (16%)
Chrna5	XP_006510836.1	LIC	41..448	CDD:273305	78/460 (17%)
		Neur_chan_LBD	47..250	CDD:280998	42/253 (17%)
		Neur_chan_memb	257..446	CDD:280999	34/200 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	2.000