Sequence 1: | NP_651958.2 | Gene: | NtR / 43935 | FlyBaseID: | FBgn0029147 | Length: | 585 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_660111.3 | Gene: | Chrna3 / 110834 | MGIID: | 87887 | Length: | 499 | Species: | Mus musculus |
Alignment Length: | 382 | Identity: | 76/382 - (19%) |
---|---|---|---|
Similarity: | 143/382 - (37%) | Gaps: | 48/382 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 176 LVINYLSFSSFGSNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSIS 240
Fly 241 FHFQTRSLA-YEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGAL 304
Fly 305 QSMGQVLQSYELMVYANGSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALI 369
Fly 370 YDDQR-KPIAPNEHVNTPSGWSFTQMSVVLVEN-DSQRRYNPKGMMQKMTGDVAIEFTLQRNRSF 432
Fly 433 YMTVFYLPLIACQMFLILSFVLRST--RRSSLILIALLIAAWGLMYMTR-YASPHYVPPMMTAYK 494
Fly 495 VIMMTTTYCYILHICIIWLDLY---PPRSKAPGWLVRVINSNVLRCILGLRFSDSTD 548 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
NtR | NP_651958.2 | Methyltransf_FA | 90..191 | CDD:289052 | 5/14 (36%) |
Neur_chan_LBD | 212..429 | CDD:280998 | 38/219 (17%) | ||
Chrna3 | NP_660111.3 | LIC | 24..490 | CDD:273305 | 73/373 (20%) |
LGIC_ECD_nAChR_A3 | 29..235 | CDD:349817 | 43/241 (18%) | ||
Cys-loop | 153..167 | CDD:349817 | 2/13 (15%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3645 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |