DRSC/TRiP Functional Genomics Resources

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Protein Alignment NtR and chrng

DIOPT Version :10

Sequence 1:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001241879.2 Gene:chrng / 100536659 ZFINID:ZDB-GENE-030131-3805 Length:540 Species:Danio rerio


Alignment Length:383 Identity:70/383 - (18%)
Similarity:137/383 - (35%) Gaps:86/383 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 CGFDG---------YGSEIAPIVKEETKTEKLLSHLNIQAENASMP-ANLSSISFHFQTRSLAYE 251
            |..:|         |...|.|:.          ||.:|......|. .||.|::           
Zfish    24 CNLEGSLHRDLMVAYNKNIRPVE----------SHGDIIDVKIKMTLTNLISLN----------- 67

  Fly   252 QTSSLLQTRMHMMMHWRDSRLVWKP----EDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQ 312
            :....|.|.:.:.|.|||.||.|..    |.:.::.....|...||.|.:.:.|       .|..
Zfish    68 EKEETLTTCVWIEMQWRDYRLRWANRTGFEVYENITRMRLPSKTIWLPDIGLEN-------NVDG 125

  Fly   313 SYELMVYAN------GSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYD 371
            .:|:.:|||      ||:......:..:| |......:|.:...|.:..........|...::.|
Zfish   126 RFEVALYANTLIDPDGSVYWLPPAIYRSS-CAIKVNYFPFDWQNCSMVFRSQTYNSNEITLMLSD 189

  Fly   372 DQRKPIAPNEHVNTPSGW------SFTQMSVVLVENDS-----QRRYNPKGMMQKMTGDVAIEFT 425
            :.          |....|      :||:....::::..     .:||.|..:..:   ::.....
Zfish   190 ED----------NVTMEWIEIDPEAFTENGEWMIKHRPAKKVINKRYRPDELEHQ---EIIFFLI 241

  Fly   426 LQRNRSFYMTVFYLPLIACQMFLILSFVL-----RSTRRSSLILIALLIAAWGLMYMTRYASPH- 484
            :||...||:....:|   |.:|..|..::     ::..:...:.|.:|:.....:::.....|. 
Zfish   242 IQRKPLFYVINIIVP---CVLFSSLGLLVYFLPAKAGGQKCTMTICILLGQTVFLFLIAKKVPET 303

  Fly   485 -YVPPMMTAYKVIMMTTTYCYILHICIIWLD--LYPPRSKAPGWLVRVINSNVLRCIL 539
             ...|::..|.:.:|:.|...::: |::.|:  |..|.:......:|.:..|:|..:|
Zfish   304 SQAVPLIGKYLMFVMSVTTITVMN-CVVVLNVSLRTPNTHPMSNTIRKVLLNILPRVL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 89..191 CDD:463505
Neur_chan_LBD 212..429 CDD:460752 43/238 (18%)
chrngNP_001241879.2 None
Blue background indicates that the domain is not in the aligned region.

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