DRSC/TRiP Functional Genomics Resources

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Protein Alignment NtR and si:ch211-256e16.4

DIOPT Version :10

Sequence 1:NP_651958.2 Gene:NtR / 43935 FlyBaseID:FBgn0029147 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001429417.1 Gene:si:ch211-256e16.4 / 100333796 ZFINID:ZDB-GENE-131121-267 Length:412 Species:Danio rerio


Alignment Length:360 Identity:65/360 - (18%)
Similarity:128/360 - (35%) Gaps:85/360 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 LQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYAN 321
            |.|::.|:..|.||.::|....|..:.:...|....|:|.:.:.......:|.|..||..:|:. 
Zfish    88 LSTQVKMITVWFDSNVLWNSYKFCQILTIAAPRNLFWRPDIVIAESVKTEIGTVESSYVQLVFF- 151

  Fly   322 GSITLYAQNLQLASWCVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTP 386
            |.:.| .:.|.|.:.|..:...:|.:..:|:|.:        ::||....|.:.....:..|.| 
Zfish   152 GYVVL-PEVLSLNTVCKLNLYRFPFDTQSCNITI--------QSVAYSNVDLKLETLHDTGVLT- 206

  Fly   387 SGWSFTQMSVVLVENDSQRRYNPKG---------------MMQKMTGDVAIEFTLQRNRSFYMTV 436
                          |.|::.:..:|               :|......:..:.|::|....::..
Zfish   207 --------------NSSKQSFQSQGEWELLNISTSKSKVFLMFGYADQLIYQITIKRRPLLHVIN 257

  Fly   437 FYLPLIACQMFLIL---SFVLRSTRRSSL-ILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVIM 497
            ..||:.   .||:|   |:.:.:.....| ..:.||:|...|:.:.....|      .|.|: :.
Zfish   258 IILPVF---FFLVLDVTSYFIDTDGADKLSFKVTLLLAISVLLLILNDTLP------STTYE-LP 312

  Fly   498 MTTTYCYILHICIIWLDLYPPRSKAPGWLVRVINSNVLRC------------------ILGLRFS 544
            :...||..: ..:|.:.           ::..|..|.||.                  :.|....
Zfish   313 LIGIYCSAI-FSLIGIS-----------ILETILVNFLRAKGAKILSASAAVTGQDDGVSGPPVD 365

  Fly   545 DSTDYCDIQENPWH-HMAKILNNLSSILVIITFAI 578
            ...|..:.|...|. .:|:|.:.:..||.::|..:
Zfish   366 QDRDQKEFQIAMWWIKVARITDMMFLILYLLTIVV 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NtRNP_651958.2 Methyltransf_FA 89..191 CDD:463505
Neur_chan_LBD 212..429 CDD:460752 34/186 (18%)
si:ch211-256e16.4NP_001429417.1 None
Blue background indicates that the domain is not in the aligned region.

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