Protein Alignment: NtR and chrnb1

• Sequence 1: NP_651958.2
• Gene: NtR
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_001240739.1
• Gene: chrnb1
• ZFINID: ZDB-GENE-070821-4
• Length: 492
• Species: Danio rerio
• Alignment Length: 368
• Identity: 77/369 (21%)
• Similarity: 149/369 (40%)
• Gaps: 51/369 (14%)

  Fly   197 CGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMP-----ANLSSISFHFQTRSLAYEQTSSL 256
            |...|.|:.......|:...:||.|..|.:...|..|     ..:..|...|.:.::..|:.:::
Zfish    11 CCLCGLGAMTGATEMEDKLMKKLFSAYNSKVRPARNPEERVVVRIGMILSSFVSLNMKDEEMNTI 75

  Fly   257 LQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGALQSMGQVLQSYELMVYAN 321
            :.    |.:.|.|.||.|.|:|:|.::.......::|.|.:.::|......|..||.: :..|:|
Zfish    76 VM----MNLEWNDYRLSWNPKDYGGVDVLRISSGKVWLPDIVLINNNDGVFGVALQVH-VQAYSN 135

  Fly   322 GSIT-----LYAQNLQLA------SW--CVDSARNWPSERVTCDIELGLNGQEGQENVALIYDDQ 373
            |.:|     ||..:..:.      .|  |....|::..:....|::..|: :.|:|...:|.|
Zfish   136 GRVTWTPPALYKSSCGVKVTYFPFDWQNCTMVFRSYTYDSSEVDLQHALD-KRGKEIKEIILD-- 197

  Fly   374 RKPIAPNEHVNTPSGWSFTQMSVVLVENDSQRRYNPKGMMQKMTGDVAIEFTLQRNRSFYMTVFY 438
                         :|:|.:.      |...:.:.:.|.:.:.:..|:.....::|...||:....
Zfish   198 -------------TGFSESG------EWHIRHKVSRKNVREDLYEDITFYLIIERKPMFYVVNIV 243

  Fly   439 LPLIACQMFLILSFVL---RSTRRSSLILIALLIAAWGLMYMTRYASPHYVPPMMTAYKVI-MMT 499
            ||.|...:..|.:|.|   ...:....|.:.|.:..:.|:...:........|::..|.:| |:.
Zfish   244 LPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLANKIPETSLGVPIIVNYLMITMIL 308

  Fly   500 TTYCYILHICIIWLDLYPPRS-KAPGWLVRVINSNVLRCILGL 541
            .|:..||.:.::.|....|.: :.|.| ||.|..::|...||:
Zfish   309 VTFSVILSVVVLNLHHRSPNTHQMPLW-VRKIFIHMLPPYLGM 350

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052
		Neur_chan_LBD	212..429	CDD:280998	46/235 (20%)
chrnb1	NP_001240739.1	LIC	6..479	CDD:273305	77/369 (21%)
		Neur_chan_LBD	26..235	CDD:280998	46/236 (19%)
		Neur_chan_memb	242..478	CDD:280999	26/111 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG3645
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100			O	PTHR18945
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.000