Protein Alignment NtR and chrnb1l

DIOPT Version :9

• Sequence 1: NP_651958.2
• Gene: NtR / 43935
• FlyBaseID: FBgn0029147
• Length: 585
• Species: Drosophila melanogaster
• Sequence 2: NP_001233249.1
• Gene: chrnb1l / 100005295
• ZFINID: ZDB-GENE-060811-1
• Length: 486
• Species: Danio rerio
• Alignment Length: 513
• Identity: 95/513 - (18%)
• Similarity: 179/513 - (34%)
• Gaps: 165/513 - (32%)

  Fly   176 LVINY-LSFSSFGSNTARWFYDCGFDGYGSEIAPIVKEETKTEKLLSHLNIQAENASMPANLSSI 239
            |.||| ::.|...|...|...:..|..|..::.|   ..|..|:::..:.:..
Zfish     4 LNINYDINGSRKASEAERRLLEDLFQDYNLKVRP---ARTWNERVMVRVGMTL------------ 53

  Fly   240 SFHFQTRSLAYEQTSSLLQTRMHMMMHWRDSRLVWKPEDFGSLESFEHPDLRIWKPHMNVLNGAL 304
                 .:.::..|.:..:.|.:.|.|.|.|.||.|.|||:..::....|.:::|:|.:.::|
Zfish    54 -----VQLISLNQKNGEMTTNVFMNMEWTDYRLSWNPEDYDKIDVVRIPPVKVWRPDIYLIN--- 110

  Fly   305 QSMGQVLQSYELMVYAN------GSIT-----LYAQNLQLA------SW--CVDSARNWPSERVT 350
            .:.||    :::.:|.|      |:::     :|..:..:.      .|  |....|::..:...
Zfish   111 NNDGQ----FDVALYVNVLVRSDGTVSWLPPAIYRSSCSIEVAYFPFDWQNCSMVFRSYTYDSSE 171

  Fly   351 CDIELGLNGQEGQENVALIYDDQRKPIAPNEHVNTPSG-WSFTQMSVVLVENDSQRRYNPKGMMQ 414
            .|::.||: ::|.|...::.|         |:..|.:| |...            .:.:.|.:..
Zfish   172 VDLQYGLD-EDGNELHEIVID---------ENAFTENGEWQIC------------HKPSRKNVQD 214

  Fly   415 KMTGDVAIEFTLQRNRSFYMTVFYLPLIACQMFLILSFVLRSTRRSSLIL-IALLIAAWGLMYMT 478
            .:..|:.....::|...||:....:|.|...:..|..|.|.......:.| |::|||....|.:.
Zfish   215 DLYEDITFYLIIERKPLFYVINIIVPCILTSVLAIFVFYLPPGAGEKMTLSISVLIALTVFMLLL 279

  Fly   479 RYASPH---YVPPMMTAYKVIMMTTTYCYILHICIIWLDLY---PPRSKAPGWLVRVINSNVLRC 537
            ....|.   .:|.::......|:..|:..||.:.:  |:|:   |.....||| ||.:..|:|..
Zfish   280 ADKVPETSLAIPIIVNYVMFTMILVTFSVILSVVV--LNLHHRTPSTHHMPGW-VRKVFINLLPR 341

  Fly   538 ILGL---------------------------------------------------------RFSD 545
            .||:                                                         |||:
Zfish   342 YLGVLRPTPEEPVEEEPKENVPMGCLGNSLRPGGEYFIRKINPELVMPWRGSHNESTVKLQRFSN 406

  Fly   546 STDYC---------------------------DIQENPWHHMAKILNNLSS-ILVIIT 575
            |.:||                           |...:.|.::|.:|:.|.. :.|:||
Zfish   407 SDNYCLILPPNLKSAIAAITYMSEQLKKQDVDDTMTDDWQYIAVVLDRLFLWLFVVIT 464

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
NtR	NP_651958.2	Methyltransf_FA	90..191	CDD:289052	6/15 (40%)
		Neur_chan_LBD	212..429	CDD:280998	39/236 (17%)
chrnb1l	NP_001233249.1	LIC	11..473	CDD:273305	91/506 (18%)
		Neur_chan_LBD	20..230	CDD:280998	44/258 (17%)
		Neur_chan_memb	237..472	CDD:280999	43/231 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910