DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fal and samhd1

DIOPT Version :10

Sequence 1:NP_536789.3 Gene:fal / 43927 FlyBaseID:FBgn0028380 Length:368 Species:Drosophila melanogaster
Sequence 2:NP_001153405.1 Gene:samhd1 / 553453 ZFINID:ZDB-GENE-090313-386 Length:622 Species:Danio rerio


Alignment Length:449 Identity:106/449 - (23%)
Similarity:180/449 - (40%) Gaps:140/449 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLGLLPWAIDKKADHKRYDHCLGAYKSAQDHLR 66
            :..|.:||.|||...:...::.|.||||:|:.||| ..:.:...|.|.|::|.:|....|...::
Zfish    96 VFNDPIHGHIELHPLLLHFIDTPQFQRLRHIKQLG-GTYLVFPGASHNRFEHSIGVGYLAGCLVK 159

  Fly    67 AI-ERNSH-YEPKLPDWCRQAVEIAALLHDIGHGPMSH--------------AW--ELVTHHEFD 113
            |: ||... :..|....|   |:||.|.||:||||.||              .|  |:.:...||
Zfish   160 ALNERQPELFITKQDILC---VQIAGLCHDLGHGPFSHMFDGMFIPKARPADKWKHEIASVQMFD 221

  Fly   114 H--EENAMACVDKIFKDALNQELVSLRDDGGGRGVQLIKALILGSSENLPFPMLGH----TYIFD 172
            |  |.|.:..|.......|.::|:.:::...|.    :::.:|..|:   :|..|.    :::::
Zfish   222 HLVEVNGLEAVMLHHGMRLPEDLIFIKEQIAGP----LESAVLDQSQ---WPYKGRPVEKSFLYE 279

  Fly   173 IVHNRRCGLDVDKWDYLRRDNKRLKILSSAEMDFDDVFLQARI-SPDGQR-IEYRYADYHRVYRL 235
            :|.|:|.|:|||||||..||...|.|.::  .|:......||: ...|:: |..|..:...:|.:
Zfish   280 VVANKRNGIDVDKWDYFARDCYHLGIQNN--FDYQRFLRFARVCEVKGRKHICTRDKEVGNLYDM 342

  Fly   236 FEARSLLHVKAYQ-------------------------------YPLTCAM----------DVIF 259
            |..|:.||.:|||                               :.::.|:          |.||
Zfish   343 FHTRNCLHRRAYQHKVGNIIETMITEAFLKADPHIQIQGSSGRIFTISSAIEDMEAYSKLTDHIF 407

  Fly   260 VSVVQRIAPELLSIRS----------------------------KDPKWLE-------------- 282
            ..::....|||...|:                            |...|.:              
Zfish   408 EQILYSSGPELSEARAILQNIICRRLYKCVGQTTSETNVDVSQEKLLDWAKELARSKPTGTEGNL 472

  Fly   283 LTDEYVLNVI-------EKDPISR---YVK-EPHRLVEVPSNDCS-------GSDIIRV 323
            :.:::|::||       ||:||:.   |.| :|.:.:::.....|       ...:|||
Zfish   473 IAEDFVVSVIHMDYGMKEKNPINNVHFYCKNDPTKAIKIHKKQVSKLLPERFAEQLIRV 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
falNP_536789.3 YdhJ 1..300 CDD:440696 99/416 (24%)
samhd1NP_001153405.1 SAM_HD 22..89 CDD:188907
YdhJ 94..437 CDD:440696 90/353 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 571..622
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.