DRSC/TRiP Functional Genomics Resources

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Protein Alignment fal and samhd1

DIOPT Version :10

Sequence 1:NP_536789.3 Gene:fal / 43927 FlyBaseID:FBgn0028380 Length:368 Species:Drosophila melanogaster
Sequence 2:XP_031750194.1 Gene:samhd1 / 100498574 XenbaseID:XB-GENE-976503 Length:630 Species:Xenopus tropicalis


Alignment Length:357 Identity:99/357 - (27%)
Similarity:162/357 - (45%) Gaps:65/357 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LIEDEVHGVIELSSHIQEIVEHPLFQRLKHVHQLG----LLPWAIDKKADHKRYDHCLGAYKSAQ 62
            :..|.:||.|||...:..|::.|.||||:::.|||    :.|     .|.|.|::|.:|....|.
 Frog   114 VFNDPIHGHIELHPLLVRIIDTPEFQRLRYIKQLGGSYYVFP-----GASHNRFEHSIGVGYLAG 173

  Fly    63 DHLRAIERNSHYEPKLPDWCRQ--AVEIAALLHDIGHGPMSHAWE------LVTHHEFDHEENAM 119
            ..::|:...   :|:|....|.  .|:||.|.||:||||.||.::      .....:|.||..::
 Frog   174 CLVQALHER---QPELQINHRDMLCVQIAGLCHDLGHGPFSHMFDGRFMPLACPKRKFKHESASV 235

  Fly   120 ACVDKIFK-----DALNQELVSLRDDGGGRGVQLIKALILG-----------SSEN-LPFPMLGH 167
            |..|.:.|     :.:.:..:.|.||     :..||..|.|           ||:| ..:|..|.
 Frog   236 AMFDHLIKSNGLEEVMKEYGLCLPDD-----LTFIKEQIAGPLSSEDEQQFNSSQNSSSWPYRGR 295

  Fly   168 T----YIFDIVHNRRCGLDVDKWDYLRRDNKRLKILSSAEMDFDDVFLQARISPDGQR--IEYRY 226
            |    ::::||.|:|.|:|||||||..||...|.|.::  .|:......||:...|.:  |..|.
 Frog   296 TEEKSFLYEIVANKRNGIDVDKWDYFARDCHHLGIQNN--FDYKRFLKFARVCEVGSKKHICTRD 358

  Fly   227 ADYHRVYRLFEARSLLHVKAYQYPLTCAMDVIFVSVVQRIAPELLSIRSKDPK------------ 279
            .:...:|.:|..|:.||.:|||:.:...::.:......:..|. :.|:..|..            
 Frog   359 KEVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFIKADPH-IRIKGSDGNYYTISGSVDDMV 422

  Fly   280 -WLELTDEYVLNVIEKD-PISRYVKEPHRLVE 309
             :.:|||....:::..| |..:..:|..|.||
 Frog   423 AYTKLTDNIYHHILYSDNPDLKEAREILRKVE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
falNP_536789.3 YdhJ 1..300 CDD:440696 95/346 (27%)
samhd1XP_031750194.1 SAM_HD 40..107 CDD:188907
YdhJ 112..460 CDD:440696 99/357 (28%)
Blue background indicates that the domain is not in the aligned region.

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