DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF30

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001092907.1 Gene:ZNF30 / 90075 HGNCID:13090 Length:624 Species:Homo sapiens


Alignment Length:572 Identity:168/572 - (29%)
Similarity:235/572 - (41%) Gaps:124/572 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 HQLANQQNPAPNQN------QSSNDPQHSGSNAGESGNPHVQQNGGPQNDPGNSFRTPDYYDPRH 212
            ||..::|.|...|.      |.|...||...::.|..|        ...:.|.:|          
Human   112 HQKISRQKPRECQEYGKTLCQDSKPVQHERIHSSEKPN--------RCKECGKNF---------- 158

  Fly   213 AAPQGGMLAPPGFPPLHY-LNKGVLPMEQSGGGGGAGGGEAYALPEMLPAQQNGQQNAGPANTNA 276
              ..|..|.      :|. |:.|..|.:....|.....|.|:.        ::|:.:.|......
Human   159 --SNGHQLT------IHQRLHVGEKPYKYEKCGKAFISGSAFV--------KHGRIHTGEKPLKC 207

  Fly   277 NEGGAGANGSGGVGGATGASVGVGSVGVTSG--GRTGNGPGRPHKNK-PHSDLRLFKCLTCGKDF 338
            .:.|...:||..:  ....|:..|......|  |:.....|:..::: .|:..:.|.|..|||.|
Human   208 KQCGKTISGSYQL--TVHKSIHTGKKPYECGECGKAFLVYGKLTRHQSTHTGEKPFGCEECGKAF 270

  Fly   339 KQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQH 403
            ...|.|:||.||||..:|:.|.||||.|...|.|.:|.|||..|||:.|..|.:||.....|.:|
Human   271 STFSYLVQHQRIHTSEKPYECKECGKAFSTSSPLAKHQRIHTGEKPYECKECGKSFTVYGQLTRH 335

  Fly   404 IRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNG----------PHPTLWPSDVP 458
            ..||:|||||.|.||||.||..:.|:.|.|.|.::.|:...:.|          .|..|...:.|
Human   336 QSIHTGEKPFECKECGKAFRLSSFLHAHQRIHAEIKPYGCKECGRTFSRASYLVQHGRLHTGEKP 400

  Fly   459 FPGEDNDTKGDIAGTGGGY---HDEDSQGTPDGSGGMHYPSYFKD-GKG----------QKILPE 509
            :..::...    |.:.|.|   |.....|        ..|...|: ||.          |::   
Human   401 YECKECGK----AFSTGSYLVQHQRIHTG--------EKPYECKECGKAFISRHQLTVHQRV--- 450

  Fly   510 VLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRI 574
               |.|.:|      ..|..|.|.|:....|.||..||.:.:||.|.||||.|.:.|:|.||.||
Human   451 ---HTGEKP------YECKECGKAFRVHVHLTQHRKIHTDVKPYECKECGKTFSRASYLVQHSRI 506

  Fly   575 HTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPY---KCG------------------------ 612
            ||.:||:.|..|.:.|...:.|.||.|||||||||   |||                        
Human   507 HTGKKPYECKECGKAFSSGSYLVQHQRIHTGEKPYECNKCGKAFTVYGQLIGHQSVHTGEKPFEC 571

  Fly   613 -QCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHMN 663
             :|||.||..:.|.:|.|.|.|::||.|  ..|.:.|...:.:..|:..||:
Human   572 KECGKAFRLNSFLTEHQRVHTGEKPFKC--KKCGKTFRYSSALKVHLRKHMS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 121/361 (34%)
C2H2 Zn finger 359..379 CDD:275368 10/19 (53%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 10/44 (23%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF30NP_001092907.1 KRAB 14..75 CDD:214630
COG5048 <97..302 CDD:227381 54/225 (24%)
C2H2 Zn finger 123..143 CDD:275368 5/19 (26%)
C2H2 Zn finger 151..171 CDD:275368 5/37 (14%)
C2H2 Zn finger 179..199 CDD:275368 4/27 (15%)
C2H2 Zn finger 207..227 CDD:275368 4/21 (19%)
C2H2 Zn finger 235..255 CDD:275368 3/19 (16%)
COG5048 245..624 CDD:227381 137/403 (34%)
C2H2 Zn finger 263..283 CDD:275368 10/19 (53%)
C2H2 Zn finger 291..311 CDD:275368 10/19 (53%)
C2H2 Zn finger 319..339 CDD:275368 6/19 (32%)
C2H2 Zn finger 347..367 CDD:275368 10/19 (53%)
C2H2 Zn finger 375..395 CDD:275368 2/19 (11%)
C2H2 Zn finger 403..423 CDD:275368 4/23 (17%)
C2H2 Zn finger 431..451 CDD:275368 4/25 (16%)
C2H2 Zn finger 459..479 CDD:275368 7/19 (37%)
C2H2 Zn finger 487..507 CDD:275368 11/19 (58%)
C2H2 Zn finger 515..535 CDD:275368 7/19 (37%)
C2H2 Zn finger 543..563 CDD:275368 3/19 (16%)
C2H2 Zn finger 571..591 CDD:275368 8/19 (42%)
C2H2 Zn finger 599..619 CDD:275368 4/21 (19%)
Blue background indicates that the domain is not in the aligned region.

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