DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF90

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_009069.1 Gene:ZNF90 / 7643 HGNCID:13165 Length:601 Species:Homo sapiens


Alignment Length:372 Identity:124/372 - (33%)
Similarity:176/372 - (47%) Gaps:59/372 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   318 HKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANE 382
            || :.|:..:.:||..|||:.|..|||..|.||||..:.:.|.:|||..:..|.||.|.|||..|
Human   219 HK-RIHTGEKRYKCEDCGKELKYSSTLTAHKRIHTGEKRYKCEDCGKELKYSSTLTAHKRIHTGE 282

  Fly   383 KPFTC------------------------PY----CSRSFRQRAILNQHIRIHSGEKPFACPECG 419
            ||:.|                        ||    |.::|:..:||:.|.|||:||||:.|.|||
Human   283 KPYKCDKCGRAFISSSILYVHKISHTEEKPYKCEECGKAFKLSSILSTHKRIHTGEKPYKCEECG 347

  Fly   420 KHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQG 484
            |.||:..:|..|.|.|....|:...|.|.         .|.......|..|:      |.|....
Human   348 KAFRRSLVLRTHKRIHTGEKPYKCDKCGK---------AFISSSLLYKHKIS------HSEKKPY 397

  Fly   485 TPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIE 549
            ..:..|     ..||  :...:....:.|...:|      .:|..|||.||:.:.|..|..||..
Human   398 KCEECG-----KAFK--RSSTLTIHKISHTEEKP------YKCQECDKVFKRSSALSTHKIIHSG 449

  Fly   550 SRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQC 614
            .:||.|.||||.|::.|:||.|...||.||.:.|..|.:.|:..:.|:.|..||:||.||||.:|
Human   450 EKPYKCEECGKAFKRSSNLTTHKISHTEEKLYKCQECDKAFKYSSALSTHKIIHSGENPYKCEEC 514

  Fly   615 GKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNH 661
            ||.|::.::|.:|...|.|.:|:.|  ..|.:.|...:::|.|..:|
Human   515 GKAFKRSSVLSKHKIIHTGAKPYKC--EECGKAFKRSSQLTSHKISH 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 107/335 (32%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 9/47 (19%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 5/21 (24%)
ZNF90NP_009069.1 KRAB 4..62 CDD:214630
C2H2 Zn finger 175..195 CDD:275368
COG5048 202..588 CDD:227381 124/372 (33%)
C2H2 Zn finger 203..223 CDD:275368 2/4 (50%)
C2H2 Zn finger 231..251 CDD:275368 10/19 (53%)
C2H2 Zn finger 259..279 CDD:275368 9/19 (47%)
C2H2 Zn finger 287..307 CDD:275368 1/19 (5%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
C2H2 Zn finger 343..363 CDD:275368 10/19 (53%)
C2H2 Zn finger 371..391 CDD:275368 5/34 (15%)
C2H2 Zn finger 399..419 CDD:275368 3/26 (12%)
C2H2 Zn finger 427..447 CDD:275368 8/19 (42%)
C2H2 Zn finger 455..475 CDD:275368 10/19 (53%)
C2H2 Zn finger 483..503 CDD:275368 5/19 (26%)
C2H2 Zn finger 511..531 CDD:275368 7/19 (37%)
C2H2 Zn finger 539..559 CDD:275368 5/21 (24%)
C2H2 Zn finger 567..587 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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