DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF43

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_001243582.1 Gene:ZNF43 / 7594 HGNCID:13109 Length:818 Species:Homo sapiens


Alignment Length:363 Identity:130/363 - (35%)
Similarity:184/363 - (50%) Gaps:41/363 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 GRTGNGPGRPHK-NKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSH 371
            |:..|.|....| |:.|:..:.:||..|||.|.|.|.|..|.||||..:|:.|.||||.|.:.|:
Human   441 GKAFNWPSTLTKHNRIHTGEKPYKCEVCGKAFNQFSNLTTHKRIHTAEKPYKCEECGKAFSRSSN 505

  Fly   372 LTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQ 436
            ||:|.:||..:||:.|..|.::|:..:.|.:|...|:||||:.|.||||.|...:||.:|.|.|.
Human   506 LTKHKKIHIEKKPYKCEECGKAFKWSSKLTEHKITHTGEKPYKCEECGKAFNHFSILTKHKRIHT 570

  Fly   437 DVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQG---TPDGSGGMHYPSYF 498
            ...|:...:.|.         .|....|.|......||..::..:..|   |...:...|     
Human   571 GEKPYKCEECGK---------AFTQSSNLTTHKKIHTGEKFYKCEECGKAFTQSSNLTTH----- 621

  Fly   499 KDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFR 563
                 :||      |.|.:|      .:|..|.|.|.|.:||.:|..||.|.:||.|.||||.|:
Human   622 -----KKI------HTGGKP------YKCEECGKAFNQFSTLTKHKIIHTEEKPYKCEECGKAFK 669

  Fly   564 QQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHT 628
            ..|.||:|..|||.|||:.|..|.:.|:..:.|:.|..||||||||||.:|||.|.:.:.|.:|.
Human   670 WSSTLTKHKIIHTGEKPYKCEECGKAFKLSSTLSTHKIIHTGEKPYKCEKCGKAFNRSSNLIEHK 734

  Fly   629 RTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNT 666
            :.|.|::|:.|  ..|.:.|    ..:.|::.|...:|
Human   735 KIHTGEQPYKC--EECGKAF----NYSSHLNTHKRIHT 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 109/313 (35%)
C2H2 Zn finger 359..379 CDD:275368 10/19 (53%)
C2H2 Zn finger 387..407 CDD:275368 5/19 (26%)
C2H2 Zn finger 415..435 CDD:275368 10/19 (53%)
C2H2 Zn finger 527..547 CDD:275368 8/19 (42%)
C2H2 Zn finger 555..575 CDD:275368 10/19 (53%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
ZNF43NP_001243582.1 KRAB 13..72 CDD:214630
C2H2 Zn finger 158..177 CDD:275370
C2H2 Zn finger 185..205 CDD:275368
C2H2 Zn finger 213..233 CDD:275368
C2H2 Zn finger 241..261 CDD:275368
C2H2 Zn finger 269..289 CDD:275368
COG5048 295..763 CDD:227381 129/358 (36%)
C2H2 Zn finger 297..317 CDD:275368
C2H2 Zn finger 325..345 CDD:275368
C2H2 Zn finger 353..373 CDD:275368
C2H2 Zn finger 381..401 CDD:275368
C2H2 Zn finger 409..429 CDD:275368
C2H2 Zn finger 437..457 CDD:275368 5/15 (33%)
C2H2 Zn finger 465..485 CDD:275368 10/19 (53%)
C2H2 Zn finger 521..541 CDD:275368 5/19 (26%)
C2H2 Zn finger 549..569 CDD:275368 10/19 (53%)
C2H2 Zn finger 577..597 CDD:275368 4/28 (14%)
C2H2 Zn finger 605..625 CDD:275368 5/35 (14%)
C2H2 Zn finger 633..653 CDD:275368 8/19 (42%)
C2H2 Zn finger 661..681 CDD:275368 10/19 (53%)
C2H2 Zn finger 689..709 CDD:275368 5/19 (26%)
C2H2 Zn finger 717..737 CDD:275368 7/19 (37%)
COG5048 742..>803 CDD:227381 7/31 (23%)
C2H2 Zn finger 745..765 CDD:275368 5/25 (20%)
C2H2 Zn finger 773..793 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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