DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF253

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_066385.2 Gene:ZNF253 / 56242 HGNCID:13497 Length:499 Species:Homo sapiens


Alignment Length:335 Identity:129/335 - (38%)
Similarity:167/335 - (49%) Gaps:58/335 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   323 HSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTC 387
            |:.:.||||:.|||.||:.|||..|.:|||..:|:.|.||||.|.|.::||.|.|||..|||:.|
Human   166 HTGINLFKCIICGKAFKRSSTLTTHKKIHTGEKPYRCEECGKAFNQSANLTTHKRIHTGEKPYRC 230

  Fly   388 PYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTL 452
            ..|.::|:|.:.|..|.:||:||||:.|.||||.|.:..          |::.|.|...|..|  
Human   231 EECGKAFKQSSNLTTHKKIHTGEKPYKCEECGKAFNRST----------DLTTHKIVHTGEKP-- 283

  Fly   453 WPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVR 517
                                    |..|:.     |....| ||:....|  ||      |...:
Human   284 ------------------------YKCEEC-----GKAFKH-PSHVTTHK--KI------HTRGK 310

  Fly   518 PANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFG 582
            |.|      |..|.|.||..:.|..|..||...:||.|.||||.|...||||.|..:||.|||:.
Human   311 PYN------CEECGKSFKHCSNLTIHKRIHTGEKPYKCEECGKAFHLSSHLTTHKILHTGEKPYR 369

  Fly   583 CMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRR 647
            |..|.:.|...|.|..|.:||||||||||.:|||.|...:||.:|.|||.|::|:.|  ..|.:.
Human   370 CRECGKAFNHSTTLFSHEKIHTGEKPYKCDECGKTFTWPSILSKHKRTHTGEKPYKC--EECGKS 432

  Fly   648 FATENEVTKH 657
            |...:.:|.|
Human   433 FTASSTLTTH 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 112/303 (37%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 11/19 (58%)
C2H2 Zn finger 583..603 CDD:275368 6/19 (32%)
C2H2 Zn finger 611..631 CDD:275368 9/19 (47%)
C2H2 Zn finger 639..661 CDD:275368 5/19 (26%)
ZNF253NP_066385.2 KRAB 4..62 CDD:214630
C2H2 Zn finger 146..166 CDD:275368 129/335 (39%)
COG5048 170..>497 CDD:227381 128/331 (39%)
C2H2 Zn finger 174..194 CDD:275368 10/19 (53%)
C2H2 Zn finger 202..222 CDD:275368 11/19 (58%)
C2H2 Zn finger 230..250 CDD:275368 6/19 (32%)
C2H2 Zn finger 258..278 CDD:275368 9/29 (31%)
C2H2 Zn finger 286..306 CDD:275368 8/33 (24%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..362 CDD:275368 11/19 (58%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
C2H2 Zn finger 398..418 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..446 CDD:275368 5/19 (26%)
C2H2 Zn finger 454..474 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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