DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and Zfp60

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_033586.2 Gene:Zfp60 / 22718 MGIID:99207 Length:704 Species:Mus musculus


Alignment Length:759 Identity:176/759 - (23%)
Similarity:279/759 - (36%) Gaps:222/759 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAINFSASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDAERNPGAIGATPAQWGSEMYPN 65
            :|::||....||:.|..||                                          :|.|
Mouse    19 VAVDFSQEEWACLDATQKV------------------------------------------LYRN 41

  Fly    66 IQQQAQQHLTA---------------QQQQQQQQQNAAQAAAQAAAVAAAAGQPQSPPGGGQEAR 115
            |..:...:|.|               :|:::...           ||....|:|......|.||.
Mouse    42 IMLETYSNLVAVVGRCIPKPDLIVLLEQEKEPWM-----------AVKKETGRPSQGLETGFEAE 95

  Fly   116 DNGSGDGRQQQVSPSSSPYPSVQQQQR---------ANGAG---DEDPMNHQLANQQNPAPNQNQ 168
            :...    :..|.....|..::||..:         :||.|   .::|.|:|..:......|:.:
Mouse    96 NRSP----KNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQNYQEGDANRNITNKKE 156

  Fly   169 SSNDPQHSGSNAGESGNPHVQQNGGPQNDPGNSFRTPDYYDPRHAAPQGGMLAPPGFPPLHY--- 230
            .|.  ..|.:.|.....|:      ...|.|..|....                    .||.   
Mouse   157 MST--YTSKTLAHNKEKPY------KCKDCGKCFGCKS--------------------NLHQHES 193

  Fly   231 LNKGVLPMEQSGGGGGAGGGEAYALPEMLPAQQNGQQNAGPANTNANEGGAGANGSGGVGGATGA 295
            ::.|..|.|..      ..|:.:.||:||...|....:..|...|.                   
Mouse   194 IHTGEKPYECK------DCGKTFRLPQMLSRHQKSHSDERPFECNI------------------- 233

  Fly   296 SVGVGSVGVTSGGRTGNGPG--RPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDRIHTDARPFP 358
                       .|::.:.|.  :.||| .|:.|:.|:|..|||.|.:.|||.||..||...:|:.
Mouse   234 -----------CGKSFHLPTLLQYHKN-IHTGLKPFECEECGKSFNRISTLFQHRTIHAGMKPYK 286

  Fly   359 CSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFACPECGKHFR 423
            |:.|||.|.::|:|.||.:||:.::||.|..|.::|...|.|.:|..||:.:|.|.|.:|||.|.
Mouse   287 CNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIFS 351

  Fly   424 QKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGGGYHDEDSQGTPDG 488
            ..:.|.:|..||.:..|.                         :.:|.|.....|          
Mouse   352 NGSYLLRHYDTHTNEKPF-------------------------ECNICGKAFRLH---------- 381

  Fly   489 SGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTLLQHGCIHIESRPY 553
               ::...:.|            .|...:|      .:|.:|:..|::|..|.:|..||.:.:||
Mouse   382 ---LYLSEHQK------------THTDEKP------FKCKLCESAFRRKYQLSEHQRIHTDVKPY 425

  Fly   554 PCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTGEKPYKCGQCGKDF 618
            .|.:|||.||::|:.|:|..|||.:|||.|..|.:.||....|.:|.|.|:.|||::|.:|||.|
Mouse   426 QCKDCGKFFRRRSNFTEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAF 490

  Fly   619 RQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNHMNPNTTKV--------RRQQQQ 675
            ...:.|:.|..:|.|..||.|  ..|.:.|...:.:.:|...|......|.        ||....
Mouse   491 HFSSQLNNHKTSHTGQTPFEC--KECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLM 553

  Fly   676 QHQQQQQQQQQQQQQQQQQNNNAVAQVANH--LMNDAKSLAAQQ 717
            ||::....::..:.:...:....:||:..|  :.|..||...:|
Mouse   554 QHEKIHSDERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQ 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 92/310 (30%)
C2H2 Zn finger 359..379 CDD:275368 9/19 (47%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 6/19 (32%)
C2H2 Zn finger 555..575 CDD:275368 9/19 (47%)
C2H2 Zn finger 583..603 CDD:275368 7/19 (37%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 4/21 (19%)
Zfp60NP_033586.2 KRAB 14..75 CDD:214630 14/97 (14%)
C2H2 Zn finger 175..195 CDD:275368 5/39 (13%)
C2H2 Zn finger 203..223 CDD:275368 6/25 (24%)
COG5048 212..640 CDD:227381 131/475 (28%)
C2H2 Zn finger 231..251 CDD:275368 6/50 (12%)
C2H2 Zn finger 259..279 CDD:275368 10/19 (53%)
C2H2 Zn finger 287..307 CDD:275368 9/19 (47%)
C2H2 Zn finger 315..335 CDD:275368 6/19 (32%)
C2H2 Zn finger 343..363 CDD:275368 7/19 (37%)
C2H2 Zn finger 371..391 CDD:275368 4/44 (9%)
C2H2 Zn finger 399..419 CDD:275368 6/19 (32%)
C2H2 Zn finger 427..447 CDD:275368 9/19 (47%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368 7/19 (37%)
C2H2 Zn finger 511..531 CDD:275368 4/21 (19%)
C2H2 Zn finger 539..559 CDD:275368 4/19 (21%)
C2H2 Zn finger 567..587 CDD:275368 3/19 (16%)
C2H2 Zn finger 595..615 CDD:275368 1/3 (33%)
C2H2 Zn finger 623..643 CDD:275368
zf-H2C2_2 636..658 CDD:463886
C2H2 Zn finger 651..671 CDD:275368
C2H2 Zn finger 679..699 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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