DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and ZNF543

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:NP_998763.2 Gene:ZNF543 / 125919 HGNCID:25281 Length:600 Species:Homo sapiens


Alignment Length:452 Identity:145/452 - (32%)
Similarity:209/452 - (46%) Gaps:91/452 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 ALPEMLPAQ----QNGQQNAGPANTNANEG-----------GAG----------ANGSGGVGGAT 293
            ||||.:..|    |...:|:....:...:|           |.|          ::...|:|...
Human    97 ALPEEVLLQEQLTQGASKNSQLGQSKDQDGPSEMQEVHLKIGIGPQRGKLLEKMSSERDGLGSDD 161

  Fly   294 GASVGVGSVGVTSGGR----TGNGPG-----RPHKNKPHSDLRLFKCLTCGKDFKQKSTLLQHDR 349
            |....:....|::.|.    ..:||.     |..||.       :||..|||.||:.:.|:||:|
Human   162 GVCTKITQKQVSTEGDLYECDSHGPVTDALIREEKNS-------YKCEECGKVFKKNALLVQHER 219

  Fly   350 IHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGEKPFA 414
            |||..:|:.|:||||.|.:.:||.|||.||..|||:.|..|.::|.:|:.|.:|.||||||||:.
Human   220 IHTQVKPYECTECGKTFSKSTHLLQHLIIHTGEKPYKCMECGKAFNRRSHLTRHQRIHSGEKPYK 284

  Fly   415 CPECGKHFRQKAILNQHVRTHQDVSPHL------IFKNGP----HPTLWPSDVPFPGEDNDTKGD 469
            |.||||.|..::....|.|:|....|.:      .|::.|    |..:...:.|:         :
Human   285 CSECGKAFTHRSTFVLHHRSHTGEKPFVCKECGKAFRDRPGFIRHYIIHTGEKPY---------E 340

  Fly   470 IAGTGGGYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEF 534
            ....|..::...            |.::.     |:|      |.||:|      ..|..|.|.|
Human   341 CIECGKAFNRRS------------YLTWH-----QQI------HTGVKP------FECNECGKAF 376

  Fly   535 KQKTTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQH 599
            .:...|:||..||...:||.|.||||.|.::|||.||.||||.|||:.|..|.:.|...:....|
Human   377 CESADLIQHYIIHTGEKPYKCMECGKAFNRRSHLKQHQRIHTGEKPYECSECGKAFTHCSTFVLH 441

  Fly   600 LRIHTGEKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNH 661
            .|.|||||||:|.:|||.|..:|.|.:|...|.|::|:.|  ..|.:.|...:.:|:|...|
Human   442 KRTHTGEKPYECKECGKAFSDRADLIRHFSIHTGEKPYEC--VECGKAFNRSSHLTRHQQIH 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 10/19 (53%)
COG5048 355..666 CDD:227381 111/317 (35%)
C2H2 Zn finger 359..379 CDD:275368 11/19 (58%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..435 CDD:275368 8/19 (42%)
C2H2 Zn finger 527..547 CDD:275368 7/19 (37%)
C2H2 Zn finger 555..575 CDD:275368 12/19 (63%)
C2H2 Zn finger 583..603 CDD:275368 5/19 (26%)
C2H2 Zn finger 611..631 CDD:275368 8/19 (42%)
C2H2 Zn finger 639..661 CDD:275368 5/21 (24%)
ZNF543NP_998763.2 KRAB 9..69 CDD:214630
COG5048 <75..329 CDD:227381 77/238 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 110..131 3/20 (15%)
C2H2 Zn finger 201..221 CDD:275368 10/19 (53%)
COG5048 223..562 CDD:227381 111/319 (35%)
C2H2 Zn finger 229..249 CDD:275368 11/19 (58%)
C2H2 Zn finger 257..277 CDD:275368 7/19 (37%)
C2H2 Zn finger 285..305 CDD:275368 8/19 (42%)
C2H2 Zn finger 313..333 CDD:275368 3/19 (16%)
C2H2 Zn finger 341..361 CDD:275368 4/42 (10%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
C2H2 Zn finger 397..417 CDD:275368 12/19 (63%)
C2H2 Zn finger 425..445 CDD:275368 5/19 (26%)
C2H2 Zn finger 453..473 CDD:275368 8/19 (42%)
C2H2 Zn finger 481..501 CDD:275368 5/21 (24%)
C2H2 Zn finger 509..529 CDD:275368
C2H2 Zn finger 537..557 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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