DRSC/TRiP Functional Genomics Resources

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Protein Alignment jim and si:zfos-932h1.3

DIOPT Version :10

Sequence 1:NP_001262221.1 Gene:jim / 43924 FlyBaseID:FBgn0027339 Length:938 Species:Drosophila melanogaster
Sequence 2:XP_021330860.1 Gene:si:zfos-932h1.3 / 100329491 ZFINID:ZDB-GENE-141222-4 Length:949 Species:Danio rerio


Alignment Length:836 Identity:188/836 - (22%)
Similarity:262/836 - (31%) Gaps:309/836 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SASFAACIAAGLKVPRQIMYCITQDTGQPYVLYKDSQDAERNPGAI-----------GATPAQWG 59
            |.|...||.:.|.||.....|:   :.:|.:|:.       .|.|:           ..|..:..
Zfish   224 SRSSGECIVSSLSVPPSARMCV---SSEPLLLHV-------QPAAVTILSSDTIIVTDYTEVELT 278

  Fly    60 SEMYPNIQQQ----AQQHLTAQQQQ-----QQQQQNAAQAAAQAAAVAAAAGQPQSPPGGGQEAR 115
            .|:...:|::    .:|..||:|..     ..||.|.                  .||...|...
Zfish   279 EELMEPMQEEESGGEEQEPTAEQHSCTNPPPPQQNNT------------------DPPPPQQNNT 325

  Fly   116 D-----NGSGDGRQQQVSPSSSPYPSVQQQQRANGAGDEDPMNHQLANQQNPAPNQN-------- 167
            |     ..:.|....|.:.:..|.|    ||     .:.||...|..|...|.|.||        
Zfish   326 DPPPPQQNNTDPPPPQQNNTDPPPP----QQ-----NNTDPPPPQQNNTDPPPPQQNNTDPPPPQ 381

  Fly   168 QSSNDPQHSGSNAGESGNPHVQQNGGPQNDPGNSFRTPDYYDPRHAA---PQ---------GGML 220
            |::.||.....|  .:..|.:|||......|..:...|    |.|.|   ||         .|..
Zfish   382 QNNTDPPPPQQN--NTDPPPLQQNNNDPPPPQQNNTDP----PPHCAQHPPQEHTHITQKLPGQT 440

  Fly   221 ----APPG-----FPPLHYLNKGVLPMEQSGGG---------GGAGGGEAYALPEMLPAQQNGQQ 267
                .|||     ..||...:....|:.:.|.|         |..|||.|..|....|..|:.:.
Zfish   441 DITQKPPGQTDITQKPLGQTDITQKPLGRRGRGRQRKSTEPMGKTGGGAAEELRAGAPHGQDREG 505

  Fly   268 NAGPANTNANEGGAGAN--------GSGGVGGATGASVGVGSVG--------------------- 303
            .|.||...|....:.|:        .:..|.....|.......|                     
Zfish   506 CADPAAPLATSEPSSASCRTRRSSKAAPPVAANPRARYACDICGRKFTRRSDVQRHQLTHTGERP 570

  Fly   304 -------------------------------------------VTSGGRTGNGPGRPH------- 318
                                                       :|:..:..:|...||       
Zfish   571 FHCGQCQKTFQHSWDLSKHCRKQHGEARFSCSVCQSDFTNLRLLTAHHKQSHGGAVPHYCSICGE 635

  Fly   319 ----------KNKPHSDLRLFKCLTCG----------------------------KDFKQKSTLL 345
                      ..:.||..:|::|..||                            |.|.:.|.:.
Zfish   636 TAGSPSALAQHRRSHSAAQLYRCPQCGEAFDTLLQRSLHRQSHRPRQRHQCPQCPKSFTRSSDVR 700

  Fly   346 QHDRIHTDARPFPCSECGKRFRQQSHLTQHLRIHANEKPFTCPYCSRSFRQRAILNQHIRIHSGE 410
            :|...|:..||..|:.|||.|..:|.|.:|...|..|:|..|..|.:||.|.:||.:|.|:|:||
Zfish   701 RHQLSHSGERPHHCTVCGKSFGLRSGLLKHQATHTGERPHCCTVCGKSFTQLSILLRHQRMHTGE 765

  Fly   411 KPFACPECGKHFRQKAILNQHVRTHQDVSPHLIFKNGPHPTLWPSDVPFPGEDNDTKGDIAGTGG 475
            :|:.|.:|||.|.....|.:|.:||.:..||                                  
Zfish   766 RPYLCSQCGKRFLSLGELLKHDKTHAEDRPH---------------------------------- 796

  Fly   476 GYHDEDSQGTPDGSGGMHYPSYFKDGKGQKILPEVLQHIGVRPANMPLYVRCPICDKEFKQKTTL 540
                                                              .||.|.|.||.|..|
Zfish   797 --------------------------------------------------TCPQCPKSFKYKRAL 811

  Fly   541 LQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPFGCMYCPRFFRQRTILNQHLRIHTG 605
            .:|...|...|||||..|||.|.:...|.:|..|||.|:||.|.:|.|.|...|.|..|.|.|||
Zfish   812 QEHMLAHTGVRPYPCRYCGKMFAKPFALNRHHLIHTGERPFSCAHCERTFLTSTELALHERTHTG 876

  Fly   606 EKPYKCGQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATENEVTKHIDNH 661
            |:|:.|..|.:.||..:.|.:|.|||.|.||..|..  |.:.:::.:.:..|...|
Zfish   877 ERPFPCTACPRRFRSSSELARHRRTHSGPRPHACRY--CPKAYSSASRLRSHTRTH 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jimNP_001262221.1 C2H2 Zn finger 331..351 CDD:275368 7/47 (15%)
COG5048 355..666 CDD:227381 93/307 (30%)
C2H2 Zn finger 359..379 CDD:275368 8/19 (42%)
C2H2 Zn finger 387..407 CDD:275368 9/19 (47%)
C2H2 Zn finger 415..435 CDD:275368 7/19 (37%)
C2H2 Zn finger 527..547 CDD:275368 9/19 (47%)
C2H2 Zn finger 555..575 CDD:275368 7/19 (37%)
C2H2 Zn finger 583..603 CDD:275368 8/19 (42%)
C2H2 Zn finger 611..631 CDD:275368 7/19 (37%)
C2H2 Zn finger 639..661 CDD:275368 3/21 (14%)
si:zfos-932h1.3XP_021330860.1 TIN2_N 23..199 CDD:240667
PAT1 <307..>439 CDD:401645 36/164 (22%)
SPT5 358..>533 CDD:444063 43/180 (24%)
zf-C2H2 543..565 CDD:395048 1/21 (5%)
C2H2 Zn finger 545..565 CDD:275368 1/19 (5%)
zf-H2C2_2 557..580 CDD:463886 0/22 (0%)
C2H2 Zn finger 573..593 CDD:275368 0/19 (0%)
C2H2 Zn finger 601..619 CDD:275368 1/17 (6%)
C2H2 Zn finger 658..678 CDD:275368 3/19 (16%)
COG5048 <679..861 CDD:227381 72/265 (27%)
C2H2 Zn finger 686..706 CDD:275368 4/19 (21%)
C2H2 Zn finger 714..734 CDD:275368 8/19 (42%)
C2H2 Zn finger 742..762 CDD:275368 9/19 (47%)
C2H2 Zn finger 770..790 CDD:275368 7/19 (37%)
C2H2 Zn finger 798..818 CDD:275368 9/19 (47%)
C2H2 Zn finger 826..846 CDD:275368 7/19 (37%)
C2H2 Zn finger 854..874 CDD:275368 8/19 (42%)
zf-H2C2_2 866..891 CDD:463886 11/24 (46%)
C2H2 Zn finger 882..902 CDD:275368 7/19 (37%)
C2H2 Zn finger 910..930 CDD:275368 3/21 (14%)
Blue background indicates that the domain is not in the aligned region.

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