DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and mrm3

DIOPT Version :9

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_001016220.1 Gene:mrm3 / 548974 XenbaseID:XB-GENE-951934 Length:415 Species:Xenopus tropicalis


Alignment Length:344 Identity:68/344 - (19%)
Similarity:105/344 - (30%) Gaps:129/344 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 KSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEWIVQLHFAFQDAKYLYMVMDFMPG-- 169
            |..|:|..:.:..||   :........|.|.::..|.....|.....|....||.:   |.|.  
 Frog    97 KRLSKVVTIAKSKKF---RDRHGQVLLEGRRLLTDALESGAVLQTLFFSRVDYLKL---FPPDKL 155

  Fly   170 ----------------GDIVS---LMGDYDIPEKWAIFY-------TMEVVLALDTIHNMGFVHR 208
                            .|:|:   |||.:..|:...|.|       |:.:.|..|.|.:.|    
 Frog   156 RKANLIKVNFDNIKIWSDVVAPQGLMGIFAKPDHEKISYPTTQTKHTLPLSLICDNIRDPG---- 216

  Fly   209 DVKPDNMLLDSYGHLKLADFGTCMRMGANGQVVSSNAV----GTPDYISPEVLQSQGVDNEYG-- 267
                              :.||.:|..|.   ...|.|    |..|...|:||:: |:...:.  
 Frog   217 ------------------NLGTILRCAAG---AGCNKVLLTKGCVDAWEPKVLRA-GMGAHFRLP 259

  Fly   268 --RECDWWSVGIFLYEMLFGETPFYADSLVGTYGKIMDHKNSLSFPPEVEISEQAKAL------- 323
              ...||..|..:|..   |...|.||:    :...|.||..       ::||:|...       
 Frog   260 VISSLDWDIVPNYLSA---GTKVFLADN----FRPDMKHKTG-------DVSEKASDYGWVSTNP 310

  Fly   324 IRAFLT-----------DRTQRLGRYGIEDIKAHPFFRNDTWS---------------------- 355
            .|..:|           |.|.:|...|:|   ...:|  ::|:                      
 Frog   311 RRILITEEGYESSGDEEDNTDKLYIPGLE---VQSYF--ESWAQSPCAIVIGGETHGLSIESLLL 370

  Fly   356 --FDNIRESVPPVVPELSS 372
              ..|.:....||||::.|
 Frog   371 AEKSNGKRLYIPVVPDIDS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 68/344 (20%)
S_TKc 87..349 CDD:214567 60/295 (20%)
SbcC 484..1088 CDD:223496
Rho_Binding 963..1027 CDD:286056
PH_ROCK 1134..1250 CDD:269948
C1 1254..1307 CDD:197519
mrm3NP_001016220.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..73
SpoU 105..406 CDD:223640 65/336 (19%)
SpoU_sub_bind 120..186 CDD:214943 14/68 (21%)
SpoU_methylase 204..401 CDD:278985 45/231 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 416 1.000 Domainoid score I653
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1059 1.000 Inparanoid score I254
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001986
OrthoInspector 1 1.000 - - otm49226
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1475
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.050

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