DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rok and wts-1

DIOPT Version :10

Sequence 1:NP_536796.2 Gene:Rok / 43916 FlyBaseID:FBgn0026181 Length:1390 Species:Drosophila melanogaster
Sequence 2:NP_492699.1 Gene:wts-1 / 172896 WormBaseID:WBGene00007047 Length:908 Species:Caenorhabditis elegans


Alignment Length:519 Identity:163/519 - (31%)
Similarity:251/519 - (48%) Gaps:123/519 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 ERRRRANTLEREMRDPTSICNVDCLLDTVSALVSDCDHESLRRLKNIEQYAAKYKPLAMQINQLR 81
            ||.:|...||:||               |||.:.|.....:..|  ::|..:||..|..|    :
 Worm   453 EREKRMKQLEKEM---------------VSAQLPDIMRNKMLGL--LQQKESKYTRLRRQ----K 496

  Fly    82 MNVEDFHFIKLIGAGAFGEVQLVRHKSSSQVYAMKRLSKFEMMKRPDSAFFWEERHIMAHANSEW 146
            |:...|..|..||.||||:|.|||...:.:|||||.|.|.:::.:..:|....||.|:|.|:|.|
 Worm   497 MSKSHFTVISHIGVGAFGKVSLVRKNDTRKVYAMKSLEKADVIMKQQAAHVKAERDILAEADSPW 561

  Fly   147 IVQLHFAFQDAKYLYMVMDFMPGGDIVSLM---GDYDIPEKWAIFYTMEVVLALDTIHNMGFVHR 208
            ||:|.|:|||...||.:|:::||||:::|:   |.::  |..|.||..|:..|::.:||:||:||
 Worm   562 IVRLFFSFQDDACLYFIMEYVPGGDMMTLLIQKGIFE--EDLARFYIAELACAIEYVHNVGFIHR 624

  Fly   209 DVKPDNMLLDSYGHLKLADFGTCMRM---------GANG-------------------------- 238
            |:||||:|:|.:||:||.|||.|..:         |...                          
 Worm   625 DLKPDNILIDQHGHIKLTDFGLCTGLRWTHDRRYYGPENDHHRVDSFSLPPEVAAIDKSVKVLNV 689

  Fly   239 -----QVVSSNAVGTPDYISPEVLQSQGVDNEYGRECDWWSVGIFLYEMLFGETPFYADSLVGTY 298
                 ::.:.:.|||.:|::|||:...|    :.:.|||||.|:.||||:||..||:.|:..||.
 Worm   690 RQQTRRITAHSLVGTGNYMAPEVIAKTG----HNQSCDWWSTGVILYEMVFGRVPFHDDTPGGTQ 750

  Fly   299 GKIMDHKNSLSFPPEVEISEQAKALIRAFLTDRTQRLGRYGIE------DIKAHPFFRNDTWSFD 357
            .:|.:.:|.|.|.....:|::...:|:..:.|.:.|||.:|.:      .:|.||:||...|.  
 Worm   751 HRIKNWRNFLDFTYCGNLSKECLMMIQQLICDASSRLGSHGKDVAERTAQVKNHPWFRGIDWV-- 813

  Fly   358 NIRESVPP--VVPELSSDDDTRNFE---DIERDEKPEEVFPVPKGFDGNHLP-FIGFTYTGDYQL 416
            |:|:....  .:|.::.|:||.|||   |.:|.:||        ...|.|.| |..|||.   ..
 Worm   814 NLRKLRADYIYIPRVTHDEDTSNFETFQDNDRADKP--------NVRGLHNPAFYEFTYR---HF 867

  Fly   417 LSSDTVDAESKEANVANSGAASNNHGHGHNHRHRPSNSNELKRLEALLERERGR-SEALEQQDA 479
            ..:|:|...|.                      |||....|:.|     .|.|. :|::.::|:
 Worm   868 FDTDSVGCPSL----------------------RPSRRRSLRPL-----LENGTFNESVSEEDS 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RokNP_536796.2 STKc_ROCK 61..411 CDD:270747 138/404 (34%)
Smc 527..>1121 CDD:440809
ROCK_SBD 849..920 CDD:409019
PH_ROCK 1134..1250 CDD:269948
C1_ROCK 1247..1310 CDD:410363
wts-1NP_492699.1 MobB_LATS 437..497 CDD:439269 17/64 (27%)
STKc_LATS 500..868 CDD:270749 133/386 (34%)
Blue background indicates that the domain is not in the aligned region.

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