DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and AT4G14780

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_193214.1 Gene:AT4G14780 / 827133 AraportID:AT4G14780 Length:364 Species:Arabidopsis thaliana


Alignment Length:321 Identity:87/321 - (27%)
Similarity:138/321 - (42%) Gaps:75/321 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   763 KWEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKML-----------KKGSNSVEY 816
            :||....||:...|:..|.:|.|.||....       ..||||:|           |..:|...:
plant    53 EWEIDLAKLETSNVIARGTYGTVYKGIYDG-------QDVAVKVLDWEDDGNETTAKTATNRALF 110

  Fly   817 MALLSEFQLLQEVSHPNVIKLLGACTSS----------------EAPLLIIEYARYGSLRSYL-- 863
            .   .|..:..:::||||.|.:||...:                :|..:::||...|:|:.:|  
plant   111 R---QEVTVWHKLNHPNVTKFVGASMGTTNLNIRSADSKGSLPQQACCVVVEYLPGGTLKQHLIR 172

  Fly   864 RLSRKIECAGVDFADGVEPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKICKIS 928
            ..|:|:.              .|.|:..|..:.:|::||...|:||||:...|:||...|..||:
plant   173 HKSKKLA--------------FKAVIKLALDLARGLSYLHSEKIVHRDVKTENMLLDAQKNLKIA 223

  Fly   929 DFGLTR-------DVYEDDAYLKRSRDRVPVKWMAPESLADHVYTSKSDVWSFGVLCWELITLGA 986
            |||:.|       |:..:...|         .:||||.:....|..:.||:|||:..||:.... 
plant   224 DFGVARVEALNPKDMTGETGTL---------GYMAPEVIDGKPYNRRCDVYSFGICLWEIYCCD- 278

  Fly   987 SPYPGIAPQNLWS-LLKTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLL 1046
            .|||.::..::.| ::....|.:.|..|..|:..|::|||...|..||..|    |..|:|
plant   279 MPYPDLSFVDVSSAVVLHNLRPEIPRCCPTALAGIMKTCWDGNPQKRPEMK----EVVKML 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 85/314 (27%)
AT4G14780NP_193214.1 STKc_MAP3K-like 67..335 CDD:270901 81/305 (27%)

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