DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Blk

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:XP_006252250.1 Gene:Blk / 364403 RGDID:1308859 Length:554 Species:Rattus norvegicus


Alignment Length:283 Identity:100/283 - (35%)
Similarity:155/283 - (54%) Gaps:26/283 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   763 KWEFPREKLQLDTVLGEGEFGQVLKGFATEIAGLPGITTVAVKMLKKGSNSVEYMALLSEFQLLQ 827
            :||.||:.|:|...||.|:||:|..|:      ......||:|.||:|:.|.|  |.|.|..:::
  Rat   282 EWEIPRQSLKLVRKLGSGQFGEVWMGY------YKNNMKVAIKTLKEGTMSPE--AFLGEANVMK 338

  Fly   828 EVSHPNVIKLLGACTSSEAPLLII-EYARYGSLRSYLRLSRKIECAGVDFADGVEPVNVKMVLTF 891
            .:.|..:::|....|  ..|:.|: ||...|.|..:|:            .|....:::..::..
  Rat   339 TLQHERLVRLYAVVT--REPIYIVTEYMARGCLLDFLK------------TDEGSRLSLPRLIDM 389

  Fly   892 AWQICKGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLKRSRDRVPVKWMA 956
            :.|:.:||||:..:..:||||.|.|:|:::...|||:||||.|.:  |..|..:...:.|:||.|
  Rat   390 SAQVAEGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLARII--DSEYTAQEGAKFPIKWTA 452

  Fly   957 PESLADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQNLWSLLKTGYRMDRPENCSEAVY-SI 1020
            ||::...|:|.|:||||||||..|::|.|..||||::...:...|:.||||..||.|...:| .:
  Rat   453 PEAIHFGVFTIKADVWSFGVLLMEIVTYGRVPYPGMSNPEVIRSLEHGYRMPCPETCPPELYHDV 517

  Fly  1021 VRTCWADEPNGRPSFKFLASEFE 1043
            :..||...|..||:|:||.|..|
  Rat   518 ITECWRGRPEERPTFEFLQSVLE 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 96/276 (35%)
BlkXP_006252250.1 SH3 111..164 CDD:473055
SH2 169..268 CDD:472789
Protein Kinases, catalytic domain 282..545 CDD:473864 100/283 (35%)
Blue background indicates that the domain is not in the aligned region.

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