DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and Wsck

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_733018.1 Gene:Wsck / 318600 FlyBaseID:FBgn0046685 Length:791 Species:Drosophila melanogaster


Alignment Length:451 Identity:107/451 - (23%)
Similarity:181/451 - (40%) Gaps:99/451 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   664 GVRRGTPPNQPLQDP-----MLLGVLNV--------------------------AGFECDRSCMF 697
            |.|.|...|:||..|     :.||:::.                          |.||..:|.:.
  Fly   339 GKRYGRFTNKPLDQPDAHVHISLGLVSTLEGVTKTMYSRGTHDQHVTSLDDFSYATFEKGQSSVV 403

  Fly   698 -FVITCPLLFVLLLLCLL----IAQRKMLQRRL---GKQSMTTSSKQALPESGG----------- 743
             ..:||.:....|||.|:    :..:....|||   ....||..:.....|:.|           
  Fly   404 ALAVTCVIFGSCLLLSLIAYFYLRYKTCRGRRLTGGNTHEMTLQTPIIERENNGYLVEDDPLPHS 468

  Fly   744 -GDF--ALMPLQSGFRFESGDAKWEFPREKLQLDT--VLGEGEFGQVLKG------FATEIAGLP 797
             .:|  .|..|..|:.        ..||..|:|:.  |:|:|.||:::.|      ||.:     
  Fly   469 PENFKQQLQQLVEGYE--------RIPRNALRLNVNDVIGDGRFGEIITGKVSTNDFARD----- 520

  Fly   798 GITTVAVKMLK--KGSNSVEYMALLSEFQLLQEVSHPNVIKLLGACTSSEAPLLIIEYARYGSLR 860
              .|:.|..|.  .|:...:.:..|.:...|:...|  ::...|...|.:...||.|..|     
  Fly   521 --CTLHVLCLDDLNGTTQAQLLRELRQLSQLKRQEH--LLDFYGVSASPDWFYLIFEQQR----- 576

  Fly   861 SYLRLSRK-IECAGVDFADGVEPVNVKMVLTFAWQICKGMAYLSELKLVHRDLAARNVLLADGKI 924
              :.|.|| :|...:..:..:..::.::||.:.:::...|.|||..::|||.|.:.:|.:.    
  Fly   577 --MSLKRKLVESRLMAPSPRLTSLSEQLVLQWIYELASAMNYLSSCQVVHRQLCSHSVFVT---- 635

  Fly   925 CKISDFGLTRDVYEDDAYLKRSRDRVP-VKWMAPESLA-DHVYTSKSDVWSFGVLCWELITLGAS 987
               |||.|...|:....|:..:|.:.. .:|:|||.|. .|.::::|||||...:.||...||.:
  Fly   636 ---SDFKLKLSVFGPLPYMNIARQQPDHNRWLAPEVLRHQHHHSTRSDVWSLACVAWECCALGGT 697

  Fly   988 PYPGIAPQN--LWSLLKTGYRMDRPENCSEAVYSIVRTCWADEPNGRPSFKFLASEFEKLL 1046
            ||......|  |...::...|..:|......:|.::..||..||:.|.|.:.:|....:|:
  Fly   698 PYANAVASNQQLLEAIRAAVRPAQPAYVYGDLYQLLLNCWQLEPSERSSCEDVAFGVRQLM 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 75/292 (26%)
WsckNP_733018.1 WSC 42..115 CDD:460348
fn3 130..222 CDD:394996
PTKc 497..750 CDD:270623 71/275 (26%)
Blue background indicates that the domain is not in the aligned region.

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