DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ret and old-2

DIOPT Version :10

Sequence 1:NP_477044.1 Gene:Ret / 43875 FlyBaseID:FBgn0011829 Length:1235 Species:Drosophila melanogaster
Sequence 2:NP_496123.1 Gene:old-2 / 191738 WormBaseID:WBGene00003863 Length:498 Species:Caenorhabditis elegans


Alignment Length:504 Identity:142/504 - (28%)
Similarity:213/504 - (42%) Gaps:116/504 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   611 PHSSNENKRG-----------IYS-----ASGTCICEDNGKCSCAPLDEEPKMKK-----PRKRK 654
            |.:|.:|:.|           :||     |.|.|         |  |.:..|.||     .|.:.
 Worm    38 PRASEKNELGDSNVQQIIFISLYSVFVALAIGIC---------C--LIKAYKSKKRQLPANRSKG 91

  Fly   655 NETEAEPLLGVRR-----GTPPNQPLQDPMLLGVLNVAGFECDRSCMFFVITCPLLFVLLLLCLL 714
            ||...||....::     ...|.:|...|:..|       |.|                      
 Worm    92 NEYLLEPTTADQKKRYSNNIVPPEPTPYPITSG-------EDD---------------------- 127

  Fly   715 IAQRKMLQRRLGKQSMTTSSKQALPESGGGDFALMPLQSGFRFESGDAKWEFPREKLQLD--TVL 777
                      .||.....|:::..||     ..|.|:....::....|:.|...|.|.:.  ..|
 Worm   128 ----------FGKTPSRLSNEECPPE-----LKLAPINDRIKYLHYYAEVEINEEDLDISKGRPL 177

  Fly   778 GEGEFGQVLKGF---------ATEIAGLPGITTVAVKMLKKGSNSVEYMALLSEFQLLQEV-SHP 832
            |.||||.:.|||         .||     ....||||......|.::...:..|.:::..| .||
 Worm   178 GSGEFGIIRKGFLRSKNSKNKETE-----SRLEVAVKSPLNEYNHIQQELIYDELKVMCAVGKHP 237

  Fly   833 NVIKLLGACTSSEAPLLIIEYARYGSLRSYLRLSRK-IECAGVDFADGVEPVNVKMVLTFAWQIC 896
            |::.|:|..|..|..::|.|....|.|.|:||.:|: .....:.|......:.:..:::||:||.
 Worm   238 NILALVGGITIGEKRMIISELVENGDLLSFLRKNRRNFTIDQLAFEPEKPSLGLVDLVSFAFQIA 302

  Fly   897 KGMAYLSELKLVHRDLAARNVLLADGKICKISDFGLTRDVYEDDAYLKRSRDR-VPVKWMAPESL 960
            |||.||..:..||||||.||||:....:.:|:||||.|.....|.|..:|.|. :|:.||||||:
 Worm   303 KGMEYLIHVPCVHRDLALRNVLIKGNMVIRIADFGLARRHKNKDYYKTQSVDTPLPIHWMAPESI 367

  Fly   961 ADHVYTSKSDVWSFGVLCWELITLGASPYPGIAPQN--------LWSLLKTGYRMDRPENCSEAV 1017
            ...::|.||||||:||..:||.:||.|||..:...:        :.:.|..|.|:.:|.:....:
 Worm   368 DKLLFTQKSDVWSYGVCLYELFSLGKSPYKNVIKYDERDSYCKYVLAYLNEGKRLAQPAHADAEI 432

  Fly  1018 YSIVRTCWADEPNGRPSFKFLASEFEKLL--GNNAKYIDL------ETN 1058
            |::::.||..:.|.|.:|......|||.|  .:|..::||      |||
 Worm   433 YNVMKLCWDLDMNSRTTFLDCIEFFEKELKTTSNEYFLDLTRKLRSETN 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RetNP_477044.1 Protein Kinases, catalytic domain 770..1049 CDD:473864 101/302 (33%)
old-2NP_496123.1 PTKc 175..458 CDD:270623 96/287 (33%)

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