DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and C41D11.9

DIOPT Version :10

Sequence 1:NP_524644.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_491372.1 Gene:C41D11.9 / 266651 WormBaseID:WBGene00016567 Length:195 Species:Caenorhabditis elegans


Alignment Length:168 Identity:69/168 - (41%)
Similarity:102/168 - (60%) Gaps:19/168 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 IRCNYNHGCIYGRDLNVTCE---------VINNVQCLGERSFQRQMNCRYCYQTEMWQQSCGQRS 181
            :.|.:...|..|..:.|.|.         ..|||:.:          ||:|:|.......|...:
 Worm    38 LTCTFPGDCRIGDTVKVNCTSRKGCPNPVSRNNVEAV----------CRFCWQLLPGDYDCEPAT 92

  Fly   182 SCNSATDKLFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGHW 246
            :|::::.||..|.|:.|..|:|:|.|:|.:.:.|||:.||.|:..:::|:.||||||||||||.|
 Worm    93 NCSTSSTKLLVTKCSAHSSVICMGQRNFYKRIPCNWSSGYSWTKTMILSVVLGGFGADRFYLGLW 157

  Fly   247 QEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
            :..||||||||||||||::||:||::.|:.|.|||:||
 Worm   158 KSAIGKLFSFGGLGVWTLVDVVLIAVGYIKPYDGSMYI 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_524644.1 TM2 219..268 CDD:428337 32/48 (67%)
C41D11.9NP_491372.1 TM2 130..179 CDD:428337 32/48 (67%)

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