DRSC/TRiP Functional Genomics Resources

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Protein Alignment amx and Y66D12A.21

DIOPT Version :10

Sequence 1:NP_524644.1 Gene:amx / 43869 FlyBaseID:FBgn0000077 Length:284 Species:Drosophila melanogaster
Sequence 2:NP_499481.2 Gene:Y66D12A.21 / 176581 WormBaseID:WBGene00013446 Length:179 Species:Caenorhabditis elegans


Alignment Length:151 Identity:51/151 - (33%)
Similarity:78/151 - (51%) Gaps:23/151 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 DLNVTCEVINNVQCLGERSFQRQMNCR-YCYQTEMWQQSCGQRSSCNSATDKLFRTNCTVHHDVL 202
            |..|.|:.::..|.|          |: |...| :.|||.    :|  |.|...:..|.....:.
 Worm    17 DATVKCDDLDPNQYL----------CKNYAVDT-ITQQSV----TC--AADNSIQVMCETAEHIK 64

  Fly   203 CLGNRSF-----TRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGIGKLFSFGGLGVW 262
            |:|...|     |....|::.....::|.:|:|:.||.||.||.|||::..|:.|:||.|||.|:
 Worm    65 CVGKDQFGIFNRTVPSACHYGAHVSYTTTVLLSIFLGFFGIDRIYLGYYALGLIKMFSLGGLFVF 129

  Fly   263 TIIDVLLISMHYLGPADGSLY 283
            .::|::|||:..||||||:.|
 Worm   130 WLVDIILISLQLLGPADGTAY 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
amxNP_524644.1 TM2 219..268 CDD:428337 21/48 (44%)
Y66D12A.21NP_499481.2 TM2 88..135 CDD:428337 21/46 (46%)

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