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Protein Alignment: amx and tm2d3
Sequence 1: | NP_001245591.1 |
Gene: | amx |
FlyBaseID: | FBgn0000077 |
Length: | 284 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002937906.1 |
Gene: | tm2d3 |
XenbaseID: | XB-GENE-5805754 |
Length: | 247 |
Species: | Xenopus tropicalis |
Alignment Length: | 234 |
Identity: | 104/235 (44%) |
Similarity: | 135/235 (57%) |
Gaps: | 24/235 (10%) |
Fly 72 VSSMVAKSGGG----------AGGLLDNITAYSSSSSSSSSNGNNNMLCPYDKETP----CDRLQ 122
::.|...||.| |..|.|: :.||:.::|:......:..|.::.| |.||.
Frog 17 ITQMYVLSGRGFLSFEYSEPVAQPLKDH---FPSSTIATSTRATATKIPDYMEKCPSNGQCSRLP 78
Fly 123 FPCIRCNYNHGCIYGRDLNVTCEVINNVQCLGERS-----FQRQMNCRYCYQTEMWQQSCGQRSS 182
..|:.|..|:.||||:.:...|...|.|.|....| |...|.|::|:|.......|...||
Frog 79 SDCMTCATNYSCIYGKPVTFNCTAKNGVVCFDVNSQPQEYFTISMTCQFCWQLPPSDYVCNLSSS 143
Fly 183 CN--SATDKLFRTNCTVHHDVLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGH 245
|. |...:.:.|.|||.....|||||:|.:.|.||||.||:|||||.:|:|||||||||||||.
Frog 144 CKTVSCPRQRYNTTCTVLDHAHCLGNRTFPKMLYCNWTGGYKWSTALALSITLGGFGADRFYLGQ 208
Fly 246 WQEGIGKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI 284
|:||:||||||||||:||:|||.|||:.|:|||||||||
Frog 209 WREGLGKLFSFGGLGIWTLIDVFLISVGYVGPADGSLYI 247
|
Known Domains:
Gene | Sequence | Domain | Region |
External ID | Identity |
amx | NP_001245591.1 |
TM2 |
219..268 |
CDD:282945 |
39/49 (80%) |
tm2d3 | XP_002937906.1 |
TM2 |
182..231 |
CDD:282945 |
39/49 (80%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
|
|
|
C264511383 |
eggNOG |
1 |
0.900 |
|
|
|
E1_KOG4272 |
Hieranoid |
1 |
1.000 |
|
|
|
|
Homologene |
1 |
1.000 |
|
|
|
H12275 |
Inparanoid |
1 |
1.050 |
197 |
1.000 |
Inparanoid score |
I3597 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
|
|
|
D1385397at2759 |
OrthoFinder |
1 |
1.000 |
|
|
|
FOG0006157 |
OrthoInspector |
1 |
1.000 |
|
|
|
T601385 |
Phylome |
1 |
0.910 |
|
0.667 |
Consistency score |
|
RoundUp |
1 |
1.030 |
|
avgDist |
Average_Evolutionary_Distance |
R2847 |
TreeFam |
1 |
0.960 |
|
|
|
|
|
11 | 10.790 |
|
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