DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atf3 and Batf2

DIOPT Version :10

Sequence 1:NP_001259125.1 Gene:Atf3 / 43867 FlyBaseID:FBgn0028550 Length:688 Species:Drosophila melanogaster
Sequence 2:XP_006231015.1 Gene:Batf2 / 309178 RGDID:1311481 Length:276 Species:Rattus norvegicus


Alignment Length:319 Identity:75/319 - (23%)
Similarity:110/319 - (34%) Gaps:113/319 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 EDEDRRRRRRERNKIAATKCRMKKRERTQNLIKESEVLDTQNVELKNQVRQLETERQKLVDMLKS 267
            |:..::.:::::|::||.:.|.|...:...|.::.|.|:.||..|:.:::.|::|..:....|..
  Rat    18 EESQKQLKKKQKNRLAAQRSRQKHTSKADALHQQHESLEKQNHALRKEIQALQSELARWGRTLHL 82

  Fly   268 H------GCQRAGGCQ--LPSQLLQSPAQ-KYLSELELETVSIDGPNSGNNNQRLQSIPSMATFK 323
            |      ||   |.|.  |||   ..|.| |.||                               
  Rat    83 HERLCGVGC---GPCPALLPS---GCPVQAKQLS------------------------------- 110

  Fly   324 YGSKTAAAMAQQLPNGYCKPSPSAQEFEHAGYQQQQQQQQQQQP--QSLNPAGNNVIDQQHANPS 386
                     .|..|:||           | |.|:|..|.....|  |.|:|.     ...|.:|.
  Rat   111 ---------GQPAPHGY-----------H-GCQEQLFQTPGSSPRAQQLSPG-----PCYHESPG 149

  Fly   387 ------PSLLSDYVPNCDGLTGSASNHPSHNNNNNNNNSSGASSNTSNNNSNISSHSS-NATSST 444
                  |||.||.:.   ..|..|...|           |.|.|..|:.:|.:.|.|. :|...:
  Rat   150 LLPFPLPSLSSDPLM---VRTPLAQLSP-----------SPALSALSSGSSRLGSFSKFDALIPS 200

  Fly   445 TPTATSSAIEF-----VKNELVDSQSPYTTALSAERFLFEPSDGFPDIKHACVLPSPCG 498
            .|....|....     ....|..|.||  .||..||    |.:|    :|   ||:..|
  Rat   201 PPDQLVSPQRLRLEQPTSGRLASSDSP--AALGPER----PQNG----EH---LPTQSG 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atf3NP_001259125.1 bZIP_ATF3 215..268 CDD:269870 14/52 (27%)
coiled coil 215..265 CDD:269870 13/49 (27%)
Batf2XP_006231015.1 bZIP 30..76 CDD:473870 13/45 (29%)
coiled coil 30..74 CDD:269834 13/43 (30%)

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