DRSC/TRiP Functional Genomics Resources

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Protein Alignment HnRNP-K and AT1G14170

DIOPT Version :10

Sequence 1:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_001117282.1 Gene:AT1G14170 / 837976 AraportID:AT1G14170 Length:479 Species:Arabidopsis thaliana


Alignment Length:54 Identity:16/54 - (29%)
Similarity:19/54 - (35%) Gaps:15/54 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ELELPNILKYIFKTIW---------QALGLLITLISIRKP--KFILCQNPPAIP 110
            |:.|||..    ..||         .|......|..:|.|  :|....|||.||
plant    21 EIRLPNSR----DRIWLGSFDSAEKAARAFDAALYCLRGPGARFNFPDNPPEIP 70

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnRNP-KNP_995906.1 KH-I_HNRNPK_rpt1 28..91 CDD:411860 7/31 (23%)
KH-I_HNRNPK_rpt2 100..170 CDD:411861 6/11 (55%)
KH-I_HNRNPK_rpt3 426..498 CDD:411862
AT1G14170NP_001117282.1 KH-I_PEPPER_rpt1_like 43..118 CDD:411887 10/28 (36%)
KH-I 147..219 CDD:469614
KH-I 274..333 CDD:469614
KH-I_PEPPER_rpt2_like 355..427 CDD:411888
Blue background indicates that the domain is not in the aligned region.

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