DRSC/TRiP Functional Genomics Resources

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Protein Alignment HnRNP-K and PCBP4

DIOPT Version :10

Sequence 1:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster
Sequence 2:XP_047304568.1 Gene:PCBP4 / 57060 HGNCID:8652 Length:426 Species:Homo sapiens


Alignment Length:479 Identity:95/479 - (19%)
Similarity:153/479 - (31%) Gaps:210/479 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYF 94
            |:|:|:.....|::|||.|:.::::|.|..|.:::.:...|||...|:....:....:: |:.: 
Human    42 TLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVS-MIAF- 104

  Fly    95 EERDEDF---------------DVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQ 144
             :.|||.               .:||:|..|..|.:|||.|.||||||:..|.: ::|..::.|.
Human   105 -KLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQ-VQVAGDLLPN 167

  Fly   145 STDRVVQTVGKQSQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYGTGSGSTRPSQ 209
            ||:|.|...|....:|..||::..:..::|.|||...|.|            ....|:.....:|
Human   168 STERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP------------SLSLGTVLLSANQ 220

  Fly   210 RGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGAGMGQRDNPFIN 274
                                   ||:..|..                 |||..|.:         
Human   221 -----------------------GFSVQGQY-----------------GAVTPAEV--------- 236

  Fly   275 PWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFGGNSGNFGQAQG 339
                                                                             
Human   237 ----------------------------------------------------------------- 236

  Fly   340 TNSLPSLGSFSQNQGGTSSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGANGAGGFNAVGG 404
                             :.|..|.|                                   :||  
Human   237 -----------------TKLQQLSS-----------------------------------HAV-- 247

  Fly   405 ANGGPNGSPNAATNVPQGHDPNNST---QVTIPKELAGAIIGKGGGRIRRIRNESSAYITIDEPL 466
                    |.|..:|..|.||...|   :..:|.:|.|.:||:.|.:|..||..|.|:|.|....
Human   248 --------PFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQA 304

  Fly   467 PNSNDRIITISGTPKQIQMAQYLL 490
            ..:.:|.:||:|:|..|.:||||:
Human   305 EGAGERHVTITGSPVSIALAQYLI 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnRNP-KNP_995906.1 KH-I_HNRNPK_rpt1 28..91 CDD:411860 15/60 (25%)
KH-I_HNRNPK_rpt2 100..170 CDD:411861 27/84 (32%)
KH-I_HNRNPK_rpt3 426..498 CDD:411862 24/68 (35%)
PCBP4XP_047304568.1 KH-I_PCBP4_rpt1 40..109 CDD:411945 17/69 (25%)
KH-I_PCBP4_rpt2 124..195 CDD:411948 26/71 (37%)
KH-I_PCBP4_rpt3 264..331 CDD:411951 24/65 (37%)

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