DRSC/TRiP Functional Genomics Resources

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Protein Alignment HnRNP-K and PCBP2

DIOPT Version :10

Sequence 1:NP_995906.1 Gene:HnRNP-K / 43862 FlyBaseID:FBgn0267791 Length:502 Species:Drosophila melanogaster
Sequence 2:NP_005007.2 Gene:PCBP2 / 5094 HGNCID:8648 Length:366 Species:Homo sapiens


Alignment Length:492 Identity:107/492 - (21%)
Similarity:168/492 - (34%) Gaps:185/492 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYF 94
            |:|:|:.....|::|||.|:.::|||.:..|.:::.:...|||.|.::.   .|..|........
Human    15 TIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG---PTNAIFKAFAMII 76

  Fly    95 EERDEDFD---------------VRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQ 144
            ::.:||..               :||::..|..|.:|||||.||||||:..|.: ::|..::.|.
Human    77 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ-VQVAGDMLPN 140

  Fly   145 STDRVVQTVGKQSQVIEAVREVITLTRDT----PIKGAIHNY--DPMNFDRVYADEYGGYGTGSG 203
            ||:|.:...|....:||.|:::..:..:|    |.||....|  .|.:...::|.....|.|||.
Human   141 STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSD 205

  Fly   204 S-----TRPSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAAGGAVAGA 263
            |     |.||.                                                      
Human   206 SASFPHTTPSM------------------------------------------------------ 216

  Fly   264 GMGQRDNPFINPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGAGGPFGGGSFGNNGFGGGPSDFG 328
                    .:||       |::                                    |.|.:..
Human   217 --------CLNP-------DLE------------------------------------GPPLEAY 230

  Fly   329 GNSGNFGQAQGTNSLPSLGSFSQNQGGTSSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGA 393
            ...|.:...|     |.|....|.....|..|.                               .
Human   231 TIQGQYAIPQ-----PDLTKLHQLAMQQSHFPM-------------------------------T 259

  Fly   394 NGAGGFNAVGGANGGPNG-----SPNAATNVPQGHDPNNSTQVTIPKELAGAIIGKGGGRIRRIR 453
            :|..||:.:..::....|     ..:|.|         .|.::|||.:|.|.|||:.|.:|..||
Human   260 HGNTGFSGIESSSPEVKGYWAGLDASAQT---------TSHELTIPNDLIGCIIGRQGAKINEIR 315

  Fly   454 NESSAYITIDEPLPNSNDRIITISGTPKQIQMAQYLL 490
            ..|.|.|.|..|:..|.||.:||:|:...|.:||||:
Human   316 QMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLI 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HnRNP-KNP_995906.1 KH-I_HNRNPK_rpt1 28..91 CDD:411860 18/60 (30%)
KH-I_HNRNPK_rpt2 100..170 CDD:411861 26/84 (31%)
KH-I_HNRNPK_rpt3 426..498 CDD:411862 29/65 (45%)
PCBP2NP_005007.2 KH-I_PCBP1_2_rpt1 13..82 CDD:411943 18/69 (26%)
KH-I_PCBP1_2_rpt2 92..169 CDD:411946 25/77 (32%)
KH-I_PCBP1_2_rpt3 285..360 CDD:411949 31/77 (40%)

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